Wolfgang Marwan

According to our database, Wolfgang Marwan authored at least 18 papers between 2008 and 2020.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2020

Disentangling a complex response in cell reprogramming and probing the Waddington landscape by automatic construction of Petri nets.

Viktoria Rätzel, Britta Werthmann, Markus Haas, Jan Strube, Wolfgang Marwan

Biosyst., 2020

2015

A Systems Genetics Approach to the Sporulation Control Network in Physarum polycephalum.

Wolfgang Marwan

Proceedings of the BICT 2015, 2015

2014

EXACT2: the semantics of biomedical protocols.

Larisa N. Soldatova, Daniel Nadis, Ross D. King, Piyali S. Basu, Emma Haddi, Véronique Baumlé, Nigel J. Saunders, Wolfgang Marwan, Brian B. Rudkin

BMC Bioinform., 2014

Integrating a priori knowledge in automatic network reconstruction.

Marie C. F. Favre, Wolfgang Marwan, Annegret Wagler

Proceedings of the 5th International Workshop on Biological Processes & Petri Nets co-located with 35th International Conference on Application and Theory of Petri Nets and Concurreny (PETRI NETS 2014), 2014

A Petri-Net-Based Framework for Biomodel Engineering.

Mary Ann Blätke, Christian Rohr, Monika Heiner, Wolfgang Marwan

Proceedings of the Large-Scale Networks in Engineering and Life Sciences, 2014

2012

A module-based approach to biomodel engineering with Petri nets.

Wolfgang Marwan, Mary Ann Blätke

Proceedings of the Winter Simulation Conference, 2012

Predicting Phenotype from Genotype through Automatically Composed Petri Nets.

Mary Ann Blätke, Monika Heiner, Wolfgang Marwan

Proceedings of the Computational Methods in Systems Biology, 2012

JAK-STAT Signalling as Example for a Database-Supported Modular Modelling Concept.

Mary Ann Blätke, Anna Dittrich, Monika Heiner, Fred Schaper, Wolfgang Marwan

Proceedings of the Computational Methods in Systems Biology, 2012

2011

Automatic network reconstruction using ASP.

Markus Durzinsky, Wolfgang Marwan, Max Ostrowski, Torsten Schaub, Annegret Wagler

Theory Pract. Log. Program., 2011

Petri nets as a framework for the reconstruction and analysis of signal transduction pathways and regulatory networks.

Wolfgang Marwan, Annegret Wagler, Robert Weismantel

Nat. Comput., 2011

Reconstruction of extended Petri nets from time series data and its application to signal transduction and to gene regulatory networks.

Markus Durzinsky, Annegret Wagler, Wolfgang Marwan

BMC Syst. Biol., 2011

2010

A predictive computational model of the kinetic mechanism of stimulus-induced transducer methylation and feedback regulation through CheY in archaeal phototaxis and chemotaxis.

Stefan Streif, Dieter Oesterhelt, Wolfgang Marwan

BMC Syst. Biol., 2010

Snoopy - a unifying Petri net framework to investigate biomolecular networks.

Christian Rohr, Wolfgang Marwan, Monika Heiner

Bioinform., 2010

Modular and Hierarchical Modelling Concept for Large Biological Petri Nets Applied to Nociception.

Mary Ann Blätke, Wolfgang Marwan

Proceedings of the 17th German Workshop on Algorithms and Tools for Petri Nets, 2010

Petri Net Modeling via a Modular and Hierarchical Approach Applied to Nociception.

Mary Ann Blätke, Sonja Meyer, Christoph Stein, Wolfgang Marwan

Proceedings of the Workshops of the 31st International Conference on Application and Theory of Petri Nets and Other Models of Concurrency (PETRI NETS 2010) and of the 10th International Conference on Application of Concurrency to System Design (ACSD 2010), 2010

2009

Extended Stochastic Petri Nets for Model-Based Design of Wetlab Experiments.

Monika Heiner, Sebastian Lehrack, David R. Gilbert, Wolfgang Marwan

Trans. Comp. Sys. Biology, 2009

2008

A mathematical approach to solve the network reconstruction problem.

Wolfgang Marwan, Annegret Wagler, Robert Weismantel

Math. Methods Oper. Res., 2008

Automatic reconstruction of molecular and genetic networks from discrete time series data.

Markus Durzinsky, Annegret Wagler, Robert Weismantel, Wolfgang Marwan

Biosyst., 2008