Xiaolei Zhu

Orcid: 0000-0002-1967-2806

Affiliations:
  • Anhui Agricultural University, School of Information and Artificial Intelligence, China
  • Anhui University, School of Life Sciences, Hefei, China
  • Purdue University, Department of Biological Science, West Lafayette, IN, USA
  • Peking University, Beijing, China (PhD 2009)


According to our database1, Xiaolei Zhu authored at least 20 papers between 2009 and 2025.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

Online presence:

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Bibliography

2025
DTI-MHAPR: optimized drug-target interaction prediction via PCA-enhanced features and heterogeneous graph attention networks.
BMC Bioinform., December, 2025

Prediction of circRNA-drug sensitivity using random auto-encoders and multi-layer heterogeneous graph transformers.
Appl. Intell., February, 2025

AVPpred-BWR: antiviral peptides prediction via biological words representation.
Bioinform., 2025

Predicting nucleic acid binding sites by attention map-guided graph convolutional network with protein language embeddings and physicochemical information.
Briefings Bioinform., 2025

2024
NeuroPpred-SHE: An interpretable neuropeptides prediction model based on selected features from hand-crafted features and embeddings of T5 model.
Comput. Biol. Medicine, 2024

iDNA-EBT: An ensemble model based on multi-scale secondary fine-tuned BERT.
Proceedings of the 15th ACM International Conference on Bioinformatics, 2024

2023
Protein-DNA interface hotspots prediction based on fusion features of embeddings of protein language model and handcrafted features.
Comput. Biol. Chem., December, 2023

A Lorentzian-ℓp norm regularization based algorithm for recovering sparse signals in two types of impulsive noise.
J. Comput. Appl. Math., 2023

miRNA-Disease Association Prediction based on Heterogeneous Graph Transformer with Multi-view similarity and Random Auto-encoder.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022
BERT-Kgly: A Bidirectional Encoder Representations From Transformers (BERT)-Based Model for Predicting Lysine Glycation Site for Homo sapiens.
Frontiers Bioinform., 2022

BERT-Kcr: prediction of lysine crotonylation sites by a transfer learning method with pre-trained BERT models.
Bioinform., 2022

2020
iPNHOT: a knowledge-based approach for identifying protein-nucleic acid interaction hot spots.
BMC Bioinform., 2020

m5CPred-SVM: a novel method for predicting m5C sites of RNA.
BMC Bioinform., 2020

2018
Protein-protein interface hot spots prediction based on a hybrid feature selection strategy.
BMC Bioinform., 2018

PseUI: Pseudouridine sites identification based on RNA sequence information.
BMC Bioinform., 2018

dbAMEPNI: a database of alanine mutagenic effects for protein-nucleic acid interactions.
Database J. Biol. Databases Curation, 2018

2016
Combined Approach of Patch-Surfer and PL-PatchSurfer for Protein-Ligand Binding Prediction in CSAR 2013 and 2014.
J. Chem. Inf. Model., 2016

DBSI server: DNA binding site identifier.
Bioinform., 2016

2015
Large-scale binding ligand prediction by improved patch-based method Patch-Surfer2.0.
Bioinform., 2015

2009
A novel method for enzyme design.
J. Comput. Chem., 2009


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