Xiaoqin Zou

Orcid: 0000-0003-0637-8648

Affiliations:
  • University of Missouri, Columbia, MO, USA


According to our database1, Xiaoqin Zou authored at least 19 papers between 2006 and 2022.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
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Links

Online presence:

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Bibliography

2022
Predicting Protein-Peptide Complex Structures by Accounting for Peptide Flexibility and the Physicochemical Environment.
J. Chem. Inf. Model., 2022

2021
Carbohydrate-protein interactions: advances and challenges.
Commun. Inf. Syst., 2021

2020
PepPro: A Nonredundant Structure Data Set for Benchmarking Peptide-Protein Computational Docking.
J. Comput. Chem., 2020

Scoring functions for protein-RNA complex structure prediction: advances, applications, and future directions.
Commun. Inf. Syst., 2020

2019
Predicting protein-ligand binding modes for CELPP and GC3: workflows and insight.
J. Comput. Aided Mol. Des., 2019

2018
MDockPeP: An ab-initio protein-peptide docking server.
J. Comput. Chem., 2018

Lessons learned from participating in D3R 2016 Grand Challenge 2: compounds targeting the farnesoid X receptor.
J. Comput. Aided Mol. Des., 2018

2017
Improving binding mode and binding affinity predictions of docking by ligand-based search of protein conformations: evaluation in D3R grand challenge 2015.
J. Comput. Aided Mol. Des., 2017

2016
Iterative Knowledge-Based Scoring Functions Derived from Rigid and Flexible Decoy Structures: Evaluation with the 2013 and 2014 CSAR Benchmarks.
J. Chem. Inf. Model., 2016

SM-TF: A structural database of small molecule-transcription factor complexes.
J. Comput. Chem., 2016

2015
Predicting peptide binding sites on protein surfaces by clustering chemical interactions.
J. Comput. Chem., 2015

2014
A Bayesian statistical approach of improving knowledge-based scoring functions for protein-ligand interactions.
J. Comput. Chem., 2014

2013
Automated Large-Scale File Preparation, Docking, and Scoring: Evaluation of ITScore and STScore Using the 2012 Community Structure-Activity Resource Benchmark.
J. Chem. Inf. Model., 2013

A nonredundant structure dataset for benchmarking protein-RNA computational docking.
J. Comput. Chem., 2013

2011
Construction and Test of Ligand Decoy Sets Using MDock: Community Structure-Activity Resource Benchmarks for Binding Mode Prediction.
J. Chem. Inf. Model., 2011

Scoring and Lessons Learned with the CSAR Benchmark Using an Improved Iterative Knowledge-Based Scoring Function.
J. Chem. Inf. Model., 2011

2010
Inclusion of Solvation and Entropy in the Knowledge-Based Scoring Function for Protein-Ligand Interactions.
J. Chem. Inf. Model., 2010

2006
An iterative knowledge-based scoring function to predict protein-ligand interactions: II. Validation of the scoring function.
J. Comput. Chem., 2006

An iterative knowledge-based scoring function to predict protein-ligand interactions: I. Derivation of interaction potentials.
J. Comput. Chem., 2006


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