Sheng-You Huang

According to our database1, Sheng-You Huang authored at least 16 papers between 2006 and 2019.

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Timeline

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Bibliography

2019
PepBDB: a comprehensive structural database of biological peptide-protein interactions.
Bioinformatics, 2019

2018
HPEPDOCK: a web server for blind peptide-protein docking based on a hierarchical algorithm.
Nucleic Acids Research, 2018

HSYMDOCK: a docking web server for predicting the structure of protein homo-oligomers with Cn or Dn symmetry.
Nucleic Acids Research, 2018

RRDB: a comprehensive and non-redundant benchmark for RNA-RNA docking and scoring.
Bioinformatics, 2018

Comprehensive assessment of flexible-ligand docking algorithms: current effectiveness and challenges.
Briefings in Bioinformatics, 2018

Protein-Protein Docking with Improved Shape Complementarity.
Proceedings of the Intelligent Computing Theories and Application, 2018

2017
HDOCK: a web server for protein-protein and protein-DNA/RNA docking based on a hybrid strategy.
Nucleic Acids Research, 2017

Efficient conformational ensemble generation of protein-bound peptides.
J. Cheminformatics, 2017

2016
HybridDock: A Hybrid Protein-Ligand Docking Protocol Integrating Protein- and Ligand-Based Approaches.
Journal of Chemical Information and Modeling, 2016

2013
Automated Large-Scale File Preparation, Docking, and Scoring: Evaluation of ITScore and STScore Using the 2012 Community Structure-Activity Resource Benchmark.
Journal of Chemical Information and Modeling, 2013

A nonredundant structure dataset for benchmarking protein-RNA computational docking.
Journal of Computational Chemistry, 2013

2011
Construction and Test of Ligand Decoy Sets Using MDock: Community Structure-Activity Resource Benchmarks for Binding Mode Prediction.
Journal of Chemical Information and Modeling, 2011

Scoring and Lessons Learned with the CSAR Benchmark Using an Improved Iterative Knowledge-Based Scoring Function.
Journal of Chemical Information and Modeling, 2011

2010
Inclusion of Solvation and Entropy in the Knowledge-Based Scoring Function for Protein-Ligand Interactions.
Journal of Chemical Information and Modeling, 2010

2006
An iterative knowledge-based scoring function to predict protein-ligand interactions: II. Validation of the scoring function.
Journal of Computational Chemistry, 2006

An iterative knowledge-based scoring function to predict protein-ligand interactions: I. Derivation of interaction potentials.
Journal of Computational Chemistry, 2006


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