Zaida Luthey-Schulten

According to our database, Zaida Luthey-Schulten authored at least 18 papers between 1994 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2021

Multiscale modeling and cinematic visualization of photosynthetic energy conversion processes from electronic to cell scales.

Melih Sener, Stuart Levy, John E. Stone, A. J. Christensen, Barry Isralewitz, Robert Patterson, Kalina Borkiewicz, Jeffrey Carpenter, C. Neil Hunter, Zaida Luthey-Schulten, Donna J. Cox

Parallel Comput., 2021

2020

An in-silico human cell model reveals the influence of spatial organization on RNA splicing.

Zhaleh Ghaemi, Joseph R. Peterson, Martin Gruebele, Zaida Luthey-Schulten

PLoS Comput. Biol., 2020

2017

Population FBA predicts metabolic phenotypes in yeast.

Piyush Labhsetwar, Marcelo C. R. Melo, John A. Cole, Zaida Luthey-Schulten

PLoS Comput. Biol., 2017

2016

Evaluation of Emerging Energy-Efficient Heterogeneous Computing Platforms for Biomolecular and Cellular Simulation Workloads.

John E. Stone, Michael J. Hallock, James C. Phillips, Joseph R. Peterson, Zaida Luthey-Schulten, Klaus Schulten

Proceedings of the 2016 IEEE International Parallel and Distributed Processing Symposium Workshops, 2016

Improving Reaction Kernel Performance in Lattice Microbes: Particle-Wise Propensities and Run-Time Generated Code.

Michael J. Hallock, Zaida Luthey-Schulten

Proceedings of the 2016 IEEE International Parallel and Distributed Processing Symposium Workshops, 2016

2015

Spatially-resolved metabolic cooperativity within dense bacterial colonies.

John A. Cole, Lars Kohler, Jamila Hedhli, Zaida Luthey-Schulten

BMC Syst. Biol., 2015

2014

Simulation of reaction diffusion processes over biologically relevant size and time scales using multi-GPU workstations.

Michael J. Hallock, John E. Stone, Elijah Roberts, Corey Fry, Zaida Luthey-Schulten

Parallel Comput., 2014

2013

Lattice microbes: High-performance stochastic simulation method for the reaction-diffusion master equation.

Elijah Roberts, John E. Stone, Zaida Luthey-Schulten

J. Comput. Chem., 2013

2012

<i>NetworkView</i>: 3D display and analysis of protein·RNA interaction networks.

John Eargle, Zaida Luthey-Schulten

Bioinform., 2012

2011

Noise Contributions in an Inducible Genetic Switch: A Whole-Cell Simulation Study.

Elijah Roberts, Andrew T. Magis, Julio O. Ortiz, Wolfgang Baumeister, Zaida Luthey-Schulten

PLoS Comput. Biol., 2011

2009

Long time-scale simulations of in vivo diffusion using GPU hardware.

Elijah Roberts, John E. Stone, Leonardo Sepulveda, Wen-mei W. Hwu, Zaida Luthey-Schulten

Proceedings of the 23rd IEEE International Symposium on Parallel and Distributed Processing, 2009

2006

Visualizing the dual space of biological molecules.

John Eargle, Zaida Luthey-Schulten

Comput. Biol. Chem., 2006

MultiSeq: unifying sequence and structure data for evolutionary analysis.

Elijah Roberts, John Eargle, Dan Wright, Zaida Luthey-Schulten

BMC Bioinform., 2006

<i>Multiple Alignment</i> of protein structures and sequences for VMD.

John Eargle, Dan Wright, Zaida Luthey-Schulten

Bioinform., 2006

2004

Classical force field parameters for the heme prosthetic group of cytochrome c.

Felix Autenrieth, Emad Tajkhorshid, Jérôme Baudry, Zaida Luthey-Schulten

J. Comput. Chem., 2004

2002

Folding funnels: The key to robust protein structure prediction.

Corey Hardin, Michael P. Eastwood, Michael C. Prentiss, Zaida Luthey-Schulten, Peter G. Wolynes

J. Comput. Chem., 2002

2001

Evaluating protein structure-prediction schemes using energy landscape theory.

Michael P. Eastwood, Corey Hardin, Zaida Luthey-Schulten, Peter G. Wolynes

IBM J. Res. Dev., 2001

1994

A Bayesian Approach to Sequence Alignment Algorithms for Protein Structure Recognition.

Richard A. Goldstein, Zaida Luthey-Schulten, Peter G. Wolynes

Proceedings of the 27th Annual Hawaii International Conference on System Sciences (HICSS-27), 1994