Alex C. Soupir

According to our database, Alex C. Soupir authored at least 6 papers between 2021 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

FastPCA: An R package for fast singular value decomposition.

Kimberly R. Ward, Mitchell Hayes, Lauren C. Peres, Brooke L. Fridley, Steven Eschrich, Alex C. Soupir

J. Open Source Softw., March, 2026

2025

scSpatialSIM: a simulator of spatial single-cell molecular data.

Alex C. Soupir, Julia Wrobel, Jordan H. Creed, Oscar E. Ospina, Christopher M. Wilson, Brandon J. Manley, Lauren C. Peres, Brooke L. Fridley

SoftwareX, 2025

2024

BatchFLEX: feature-level equalization of X-batch.

Joshua T. Davis, Alyssa N. Obermayer, Alex C. Soupir, Rebecca S. Hesterberg, Thac Duong, Ching-Yao Yang, Ken Phong Dao, Brandon J. Manley, G. Daniel Grass, Dorina Avram, Paulo C. Rodriguez, Brooke L. Fridley, Xiaoqing Yu, Mingxiang Teng, Xuefeng Wang, Timothy I. Shaw

Bioinform., 2024

2022

Tumor immune cell clustering and its association with survival in African American women with ovarian cancer.

Christopher M. Wilson, Alex C. Soupir, Ram Thapa, Jordan H. Creed, Jonathan Nguyen, Carlos Moran Segura, Travis A. Gerke, Joellen M. Schildkraut, Lauren C. Peres, Brooke L. Fridley

PLoS Comput. Biol., 2022

spatialGE: quantification and visualization of the tumor microenvironment heterogeneity using spatial transcriptomics.

Oscar E. Ospina, Christopher M. Wilson, Alex C. Soupir, Anders Berglund, Inna Smalley, Kenneth Y. Tsai, Brooke L. Fridley

Bioinform., 2022

2021

spatialTIME and iTIME: R package and Shiny application for visualization and analysis of immunofluorescence data.

Jordan H. Creed, Christopher M. Wilson, Alex C. Soupir, Christelle M. Colin-Leitzinger, Gregory J. Kimmel, Oscar E. Ospina, Nicholas H. Chakiryan, Joseph Markowitz, Lauren C. Peres, Anna Coghill, Brooke L. Fridley

Bioinform., 2021