Timothy I. Shaw

According to our database, Timothy I. Shaw authored at least 7 papers between 2010 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

An Epigenomic fingerprint of human cancers by landscape interrogation of super enhancers at the constituent level.

Xiang Liu, Nancy Gillis, Chang Jiang, Anthony McCofie, Timothy I. Shaw, Aik Choon Tan, Bo Zhao, Lixin Wan, Derek R. Duckett, Mingxiang Teng

PLoS Comput. Biol., February, 2024

2023

PATH-SURVEYOR: pathway level survival enquiry for immuno-oncology and drug repurposing.

Alyssa N. Obermayer, Darwin Chang, Gabrielle Nobles, Mingxiang Teng, Aik Choon Tan, Xuefeng Wang, Y. Ann Chen, Steven Eschrich, Paulo C. Rodriguez, G. Daniel Grass, Soheil Meshinchi, Ahmad Tarhini, Dung-tsa Chen, Timothy I. Shaw

BMC Bioinform., December, 2023

2013

HIV N-linked glycosylation site analyzer and its further usage in anchored alignment.

Timothy I. Shaw, Ming Zhang

Nucleic Acids Res., 2013

STRAW: Species TRee Analysis Web server.

Timothy I. Shaw, Zheng Ruan, Travis C. Glenn, Liang Liu

Nucleic Acids Res., 2013

2012

Stable stem enabled Shannon entropies distinguish non-coding RNAs from random backgrounds.

Yingfeng Wang, Amir Manzour, Pooya Shareghi, Timothy I. Shaw, Ying-Wai Li, Russell L. Malmberg, Liming Cai

BMC Bioinform., 2012

2011

Analyzing Modular RNA Structure reveals Low Global Structural Entropy in microRNA Sequence.

Timothy I. Shaw, Amir Manzour, Yingfeng Wang, Russell L. Malmberg, Liming Cai

J. Bioinform. Comput. Biol., 2011

2010

RNApasta: a tool for analysis of RNA structural alignments.

Russell L. Malmberg, Timothy I. Shaw, Liming Cai

Int. J. Bioinform. Res. Appl., 2010