Brooke L. Fridley

According to our database, Brooke L. Fridley authored at least 11 papers between 2008 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

Tumor immune cell clustering and its association with survival in African American women with ovarian cancer.

Christopher M. Wilson, Alex C. Soupir, Ram Thapa, Jordan H. Creed, Jonathan Nguyen, Carlos Moran Segura, Travis A. Gerke, Joellen M. Schildkraut, Lauren C. Peres, Brooke L. Fridley

PLoS Comput. Biol., 2022

2021

spatialTIME and iTIME: R package and Shiny application for visualization and analysis of immunofluorescence data.

Jordan H. Creed, Christopher M. Wilson, Alex C. Soupir, Christelle M. Colin-Leitzinger, Gregory J. Kimmel, Oscar E. Ospina, Nicholas H. Chakiryan, Joseph Markowitz, Lauren C. Peres, Anna Coghill, Brooke L. Fridley

Bioinform., 2021

2020

Network-based integrative clustering of multiple types of genomic data using non-negative matrix factorization.

Prabhakar Chalise, Yonghui Ni, Brooke L. Fridley

Comput. Biol. Medicine, 2020

GMSimpute: a generalized two-step Lasso approach to impute missing values in label-free mass spectrum analysis.

Qian Li, Kate Fisher, Wenjun Meng, Bin Fang, Eric A. Welsh, Eric B. Haura, John M. Koomen, Steven A. Eschrich, Brooke L. Fridley, Yian Ann Chen

Bioinform., 2020

2018

Subject level clustering using a negative binomial model for small transcriptomic studies.

Qian Li, Janelle R. Noel-MacDonnell, Devin C. Koestler, Ellen L. Goode, Brooke L. Fridley

BMC Bioinform., 2018

2016

An ensemble-based Cox proportional hazards regression framework for predicting survival in metastatic castration-resistant prostate cancer (mCRPC) patients.

Richard Meier, Stefan Graw, Joseph Usset, Rama Raghavan, Junqiang Dai, Prabhakar Chalise, Shellie Ellis, Brooke L. Fridley, Devin C. Koestler

F1000Research, 2016

InterSIM: Simulation tool for multiple integrative 'omic datasets'.

Prabhakar Chalise, Rama Raghavan, Brooke L. Fridley

Comput. Methods Programs Biomed., 2016

2013

PurBayes: estimating tumor cellularity and subclonality in next-generation sequencing data.

Nicholas B. Larson, Brooke L. Fridley

Bioinform., 2013

2012

Comparison of penalty functions for sparse canonical correlation analysis.

Prabhakar Chalise, Brooke L. Fridley

Comput. Stat. Data Anal., 2012

Comparison of Methods for Meta-dimensional Data Analysis Using in Silico and Biological Data Sets.

Emily Rose Holzinger, Scott M. Dudek, Alex T. Frase, Brooke L. Fridley, Prabhakar Chalise, Marylyn D. Ritchie

Proceedings of the Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, 2012

2008

Reproducibility of genotypes as measured by the affymetrix GeneChip^® 100K Human Mapping Array set.

Brooke L. Fridley, Stephen T. Turner, Arlene B. Chapman, Andrei S. Rodin, Eric Boerwinkle, Kent R. Bailey

Comput. Stat. Data Anal., 2008