Alfonso Urso

According to our database1, Alfonso Urso authored at least 65 papers between 2002 and 2020.

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Bibliography

2020
BITS2019: the sixteenth annual meeting of the Italian society of bioinformatics.
BMC Bioinform., 2020

miRTissue <sub>ce</sub>: extending miRTissue web service with the analysis of ceRNA-ceRNA interactions.
BMC Bioinform., 2020

2019
Data Mining: Prediction Methods.
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 1, 2019

Data Mining: Classification and Prediction.
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 1, 2019

The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes.
BMC Bioinform., 2019

MiRNA therapeutics based on logic circuits of biological pathways.
BMC Bioinform., 2019

2018
BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources.
BMC Syst. Biol., 2018

Deep learning models for bacteria taxonomic classification of metagenomic data.
BMC Bioinform., 2018

Identification of Key miRNAs in Regulation of PPI Networks.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2018

Variable Ranking Feature Selection for the Identification of Nucleosome Related Sequences.
Proceedings of the New Trends in Databases and Information Systems, 2018

2017
Energy-Efficient Low-Power Circuits for Wireless Energy and Data Transfer in IoT Sensor Nodes.
CoRR, 2017

nRC: non-coding RNA Classifier based on structural features.
BioData Min., 2017

Gremlin Language for Querying the BiographDB Integrated Biological Database.
Proceedings of the Bioinformatics and Biomedical Engineering, 2017

BioGrakn: A Knowledge Graph-Based Semantic Database for Biomedical Sciences.
Proceedings of the Complex, Intelligent, and Software Intensive Systems, 2017

2016
MiRNATIP: a SOM-based miRNA-target interactions predictor.
BMC Bioinform., 2016

A Deep Learning Model for Epigenomic Studies.
Proceedings of the 12th International Conference on Signal-Image Technology & Internet-Based Systems, 2016

The Database-is-the-Service Pattern for Microservice Architectures.
Proceedings of the Information Technology in Bio- and Medical Informatics, 2016

Integrated DB for Bioinformatics: A Case Study on Analysis of Functional Effect of MiRNA SNPs in Cancer.
Proceedings of the Information Technology in Bio- and Medical Informatics, 2016

Classification Experiments of DNA Sequences by Using a Deep Neural Network and Chaos Game Representation.
Proceedings of the 17th International Conference on Computer Systems and Technologies, 2016

EXPO: A Modern NoSQL-based ebXML Registry for Health Information Systems.
Proceedings of the 17th International Conference on Computer Systems and Technologies, 2016

A Problem-Driven Approach for Building a Bioinformatics GraphDB.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2016

Keep It Simple, Fast and Scalable: A Multi-model NoSQL DBMS as an (eb) XML-over-SOAP Service.
Proceedings of the 30th International Conference on Advanced Information Networking and Applications Workshops, 2016

2015
Probabilistic topic modeling for the analysis and classification of genomic sequences.
BMC Bioinform., 2015

Analysis of miRNA expression profiles in breast cancer using biclustering.
BMC Bioinform., 2015

A k-mer-based barcode DNA classification methodology based on spectral representation and a neural gas network.
Artif. Intell. Medicine, 2015

A Deep Learning Approach to DNA Sequence Classification.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2015

2014
The BioDICE Taverna plugin for clustering and visualization of biological data: a workflow for molecular compounds exploration.
J. Cheminformatics, 2014

An expert system hybrid architecture to support experiment management.
Expert Syst. Appl., 2014

Knowledge organization for modelling workflows in Taverna environment.
Proceedings of the 22nd Mediterranean Conference on Control and Automation, 2014

The General Regression Neural Network to Classify Barcode and mini-barcode DNA.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2014

2013
Simulated annealing technique for fast learning of SOM networks.
Neural Comput. Appl., 2013

Alignment-free analysis of barcode sequences by means of compression-based methods.
BMC Bioinform., 2013

A knowledge-based decision support system in bioinformatics: an application to protein complex extraction.
BMC Bioinform., 2013

Analysis of DNA Barcode Sequences Using Neural Gas and Spectral Representation.
Proceedings of the Engineering Applications of Neural Networks, 2013

Genomic Sequence Classification Using Probabilistic Topic Modeling.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2013

2012
An Intelligent System for Building Bioinformatics Workflows.
Proceedings of the Sixth International Conference on Complex, 2012

A Study of Compression-Based Methods for the Analysis of Barcode Sequences.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2012

2011
Soft Topographic Maps for Clustering and Classifying Bacteria Using Housekeeping Genes.
Adv. Artif. Neural Syst., 2011

2010
High Performance Networks.
Proceedings of the Euro-Par 2010 - Parallel Processing, 16th International Euro-Par Conference, Ischia, Italy, August 31, 2010

A Knowledge Based Decision Support System for Bioinformatics and System Biology.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2010

2009
Normalised compression distance and evolutionary distance of genomic sequences: comparison of clustering results.
Int. J. Knowl. Eng. Soft Data Paradigms, 2009

Identifying Clusters Using Growing Neural Gas: First Results.
Proceedings of the Artificial Neural Networks, 2009

A Proposed Knowledge Based Approach for Solving Proteomics Issues.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2009

2008
Comparison of Genomic Sequences Clustering Using Normalized Compression Distance and Evolutionary Distance.
Proceedings of the Knowledge-Based Intelligent Information and Engineering Systems, 2008

A New SOM Initialization Algorithm for Nonvectorial Data.
Proceedings of the Knowledge-Based Intelligent Information and Engineering Systems, 2008

Clustering Quality and Topology Preservation in Fast Learning SOMs.
Proceedings of the Artificial Neural Networks, 2008

Clustering Bacteria Species Using Neural Gas: Preliminary Study.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2008

A New Linear Initialization in SOM for Biomolecular Data.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2008

2007
DNK-WSD: A Distributed Approach for Knowledge Discovery in Peer to Peer Networks.
Proceedings of the 15th Euromicro International Conference on Parallel, 2007

Fast Training of Self Organizing Maps for the Visual Exploration of Molecular Compounds.
Proceedings of the International Joint Conference on Neural Networks, 2007

Soft Topographic Map for Clustering and Classification of Bacteria.
Proceedings of the Advances in Intelligent Data Analysis VII, 2007

Improved SOM Learning Using Simulated Annealing.
Proceedings of the Artificial Neural Networks, 2007

2006
A Logical Architecture for Active Network Management.
J. Netw. Syst. Manag., 2006

RTDWD: Real-Time Distributed Wideband-Delphi for User Stories Estimation.
Proceedings of the Rapid Integration of Software Engineering Techniques, 2006

Context-Aware Visual Exploration of Molecular Datab.
Proceedings of the Workshops Proceedings of the 6th IEEE International Conference on Data Mining (ICDM 2006), 2006

2005
An efficient retransmission strategy for data gathering in wireless sensor networks.
Proceedings of 10th IEEE International Conference on Emerging Technologies and Factory Automation, 2005

Rule Based Reasoning for Network Management.
Proceedings of the Seventh International Workshop on Computer Architectures for Machine Perception (CAMP 2005), 2005

Reinforcement Learning for P2P Searching.
Proceedings of the Seventh International Workshop on Computer Architectures for Machine Perception (CAMP 2005), 2005

2004
The Random Neural Network Model for the On-Line Multicast Problem.
Proceedings of the Biological and Artificial Intelligence Environments, 2004

A Dynamic Reasoning Architecture for Computer Network Management.
Proceedings of the 16th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2004), 2004

Exploiting deductive processes for automated network management.
Proceedings of the 12th IEEE International Conference on Networks, 2004

A Grid Enabled Parallel Hybrid Genetic Algorithm for SPN.
Proceedings of the Computational Science, 2004

2003
A genetic algorithm for the design of a fuzzy controller for active queue management.
IEEE Trans. Syst. Man Cybern. Part C, 2003

Parallel Genetic Algorithms for the Tuning of a Fuzzy AQM Controller.
Proceedings of the Computational Science and Its Applications, 2003

2002
A Fuzzy Approach for the Network Congestion Problem.
Proceedings of the Computational Science - ICCS 2002, 2002


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