Berry de Bruijn

According to our database, Berry de Bruijn authored at least 19 papers between 2000 and 2020.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2020

Global Public Health Surveillance Using Media Reports: Redesigning GPHIN.

Dave Carter, Marta Stojanovic, Philip Hachey, Kevin Fournier, Simon Rodier, Yunli Wang, Berry de Bruijn

Proceedings of the Digital Personalized Health and Medicine - Proceedings of MIE 2020, Medical Informatics Europe, Geneva, Switzerland, April 28, 2020

Extensive Error Analysis and a Learning-Based Evaluation of Medical Entity Recognition Systems to Approximate User Experience.

Isar Nejadgholi, Kathleen C. Fraser, Berry de Bruijn

Proceedings of the 19th SIGBioMed Workshop on Biomedical Language Processing, 2020

2019

Extracting UMLS Concepts from Medical Text Using General and Domain-Specific Deep Learning Models.

Kathleen C. Fraser, Isar Nejadgholi, Berry de Bruijn, Muqun Li, Astha LaPlante, Khaldoun Zine El Abidine

CoRR, 2019

Recognizing UMLS Semantic Types with Deep Learning.

Isar Nejadgholi, Kathleen C. Fraser, Berry de Bruijn, Muqun Li, Astha LaPlante, Khaldoun Zine El Abidine

Proceedings of the Tenth International Workshop on Health Text Mining and Information Analysis LOUHI@EMNLP 2019, 2019

2018

Data and systems for medication-related text classification and concept normalization from Twitter: insights from the Social Media Mining for Health (SMM4H)-2017 shared task.

Abeed Sarker, Maksim Belousov, Jasper Friedrichs, Kai Hakala, Svetlana Kiritchenko, Farrokh Mehryary, Sifei Han, Tung Tran, Anthony Rios, Ramakanth Kavuluru, Berry de Bruijn, Filip Ginter, Debanjan Mahata, Saif M. Mohammad, Goran Nenadic, Graciela Gonzalez-Hernandez

J. Am. Medical Informatics Assoc., 2018

2017

NRC-Canada at SMM4H Shared Task: Classifying Tweets Mentioning Adverse Drug Reactions and Medication Intake.

Svetlana Kiritchenko, Saif M. Mohammad, Jason Morin, Berry de Bruijn

Proceedings of the 2nd Social Media Mining for Health Research and Applications Workshop co-located with the American Medical Informatics Association Annual Symposium (AMIA 2017), 2017

2013

Detecting concept relations in clinical text: Insights from a state-of-the-art model.

Xiaodan Zhu, Colin Cherry, Svetlana Kiritchenko, Joel D. Martin, Berry de Bruijn

J. Biomed. Informatics, 2013

À la Recherche du Temps Perdu: extracting temporal relations from medical text in the 2012 i2b2 NLP challenge.

Colin Cherry, Xiaodan Zhu, Joel D. Martin, Berry de Bruijn

J. Am. Medical Informatics Assoc., 2013

2011

Machine-learned solutions for three stages of clinical information extraction: the state of the art at i2b2 2010.

Berry de Bruijn, Colin Cherry, Svetlana Kiritchenko, Joel D. Martin, Xiaodan Zhu

J. Am. Medical Informatics Assoc., 2011

Revisiting the Area Under the ROC.

Berry de Bruijn

Proceedings of the User Centered Networked Health Care - Proceedings of MIE 2011, 2011

2010

ExaCT: automatic extraction of clinical trial characteristics from journal publications.

Svetlana Kiritchenko, Berry de Bruijn, Simona Carini, Joel D. Martin, Ida Sim

BMC Medical Informatics Decis. Mak., 2010

2008

Automated Information Extraction of Key Trial Design Elements from Clinical Trial Publications.

Berry de Bruijn, Simona Carini, Svetlana Kiritchenko, Joel D. Martin, Ida Sim

Proceedings of the AMIA 2008, 2008

2006

Case Report: Identifying Wrist Fracture Patients with High Accuracy by Automatic Categorization of X-ray Reports.

Berry de Bruijn, Ann Cranney, Siobhan O'Donnell, Joel D. Martin, Alan J. Forster

J. Am. Medical Informatics Assoc., 2006

2003

PreBIND and Textomy - mining the biomedical literature for protein-protein interactions using a support vector machine.

Ian M. Donaldson, Joel D. Martin, Berry de Bruijn, Cheryl Wolting, Vicki Lay, Brigitte Tuekam, Shudong Zhang, Berivan Baskin, Gary D. Bader, Katerina Michalickova, Tony Pawson, Christopher W. V. Hogue

BMC Bioinform., 2003

Finiding Gene Function using LitMiner.

Berry de Bruijn, Joel D. Martin

Proceedings of The Twelfth Text REtrieval Conference, 2003

Haystacks and hypotheses.

Jeffrey Demaine, Joel D. Martin, Berry de Bruijn

Proceedings of the Humanizing Information Technology: From Ideas to Bits and Back, 2003

2002

Getting to the (c)ore of knowledge: mining biomedical literature.

Berry de Bruijn, Joel D. Martin

Int. J. Medical Informatics, 2002

2001

Extracting Keyphrases from Spoken Audio Documents.

Alain Désilets, Berry de Bruijn, Joel D. Martin

Proceedings of the Information Retrieval Techniques for Speech Applications [this book is based on the workshop "Information Retrieval Techniques for Speech Applications", 2001

2000

Supporting the classification of pathology reports: comparing two information retrieval methods.

Berry de Bruijn, Arie Hasman, Jan Willem Arends

Comput. Methods Programs Biomed., 2000