Ramakanth Kavuluru
Orcid: 0000-0003-1238-9378Affiliations:
- University of Kentucky, Division of Biomedical Informatics, Department of Internal Medicine, Lexington, KY, USA
According to our database1,
Ramakanth Kavuluru
authored at least 89 papers
between 2007 and 2024.
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on cs.uky.edu
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Bibliography
2024
How Important is Domain Specificity in Language Models and Instruction Finetuning for Biomedical Relation Extraction?
CoRR, 2024
Proceedings of the Thirty-Eighth AAAI Conference on Artificial Intelligence, 2024
2023
An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C).
J. Am. Medical Informatics Assoc., November, 2023
A Comparative Effectiveness Study on Opioid Use Disorder Prediction Using Artificial Intelligence and Existing Risk Models.
IEEE J. Biomed. Health Informatics, July, 2023
Comparison of pipeline, sequence-to-sequence, and GPT models for end-to-end relation extraction: experiments with the rare disease use-case.
CoRR, 2023
COVID-19 Event Extraction from Twitter via Extractive Question Answering with Continuous Prompts.
Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023
End-to-End Models for Chemical-Protein Interaction Extraction: Better Tokenization and Span-Based Pipeline Strategies.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023
2022
ReCDroid+: Automated End-to-End Crash Reproduction from Bug Reports for Android Apps.
ACM Trans. Softw. Eng. Methodol., 2022
Contrastive Cross-Modal Pre-Training: A General Strategy for Small Sample Medical Imaging.
IEEE J. Biomed. Health Informatics, 2022
International electronic health record-derived post-acute sequelae profiles of COVID-19 patients.
npj Digit. Medicine, 2022
Toward informatics-enabled preparedness for natural hazards to minimize health impacts of climate change.
J. Am. Medical Informatics Assoc., 2022
Health Informatics J., 2022
Proceedings of the WebSci '22: 14th ACM Web Science Conference 2022, Barcelona, Spain, June 26, 2022
Proceedings of the AMIA 2022, 2022
2021
J. Biomed. Informatics, 2021
Int. J. Medical Informatics, 2021
Attention-Gated Graph Convolutions for Extracting Drug Interaction Information from Drug Labels.
ACM Trans. Comput. Heal., 2021
An Open Natural Language Processing Development Framework for EHR-based Clinical Research: A case demonstration using the National COVID Cohort Collaborative (N3C).
CoRR, 2021
Predicting Opioid Use Disorder from Longitudinal Healthcare Data using Multi-stream Transformer.
CoRR, 2021
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021
Assigning ICD-O-3 codes to pathology reports using neural multi-task training with hierarchical regularization.
Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021
Joint learning for biomedical NER and entity normalization: encoding schemes, counterfactual examples, and zero-shot evaluation.
Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021
Identifying Opioid Use Disorder from Longitudinal Healthcare Data using a Multi-stream Transformer.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
2020
Literature Retrieval for Precision Medicine with Neural Matching and Faceted Summarization.
CoRR, 2020
Document Reranking for Precision Medicine with Neural Matching and Faceted Summarization.
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2020, 2020
2019
Cross-registry neural domain adaptation to extract mutational test results from pathology reports.
J. Biomed. Informatics, 2019
Attention-Gated Graph Convolution for Extracting Drugs and Their Interactions from Drug Labels.
CoRR, 2019
Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.
Database J. Biol. Databases Curation, 2019
Distant supervision for treatment relation extraction by leveraging MeSH subheadings.
Artif. Intell. Medicine, 2019
Artif. Intell. Medicine, 2019
Proceedings of the World Wide Web Conference, 2019
Non-Negative Matrix Factorization for Drug Repositioning: Experiments with the repoDB Dataset.
Proceedings of the AMIA 2019, 2019
2018
Exploiting semantic patterns over biomedical knowledge graphs for predicting treatment and causative relations.
J. Biomed. Informatics, 2018
Data and systems for medication-related text classification and concept normalization from Twitter: insights from the Social Media Mining for Health (SMM4H)-2017 shared task.
J. Am. Medical Informatics Assoc., 2018
CoRR, 2018
Generalizing biomedical relation classification with neural adversarial domain adaptation.
Bioinform., 2018
An end-to-end deep learning architecture for extracting protein-protein interactions affected by genetic mutations.
Database J. Biol. Databases Curation, 2018
Extracting chemical-protein relations with ensembles of SVM and deep learning models.
Database J. Biol. Databases Curation, 2018
A Multi-Task Learning Framework for Extracting Drugs and Their Interactions from Drug Labels.
Proceedings of the 2018 Text Analysis Conference, 2018
Proceedings of the 2018 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2018
Proceedings of the 17th IEEE International Conference on Machine Learning and Applications, 2018
Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium, October 31, 2018
Predicting Psychological Health from Childhood Essays with Convolutional Neural Networks for the CLPsych 2018 Shared Task (Team UKNLP).
Proceedings of the Fifth Workshop on Computational Linguistics and Clinical Psychology: From Keyboard to Clinic, 2018
2017
Team UKNLP at TREC 2017 Precision Medicine Track: A Knowledge-Based IR System with Tuned Query-Time Boosting.
Proceedings of The Twenty-Sixth Text REtrieval Conference, 2017
Supervised Approaches to Assign Cooperative Patent Classification (CPC) Codes to Patents.
Proceedings of the Mining Intelligence and Knowledge Exploration, 2017
Extracting Drug-Drug Interactions with Word and Character-Level Recurrent Neural Networks.
Proceedings of the 2017 IEEE International Conference on Healthcare Informatics, 2017
Proceedings of the Summit on Clinical Research Informatics, 2017
Proceedings of the Big Data Analytics - 5th International Conference, 2017
Proceedings of the 17th IEEE International Conference on Bioinformatics and Bioengineering, 2017
Proceedings of the 2017 IEEE EMBS International Conference on Biomedical & Health Informatics, 2017
Team UKNLP: Detecting ADRs, Classifying Medication Intake Messages, and Normalizing ADR Mentions on Twitter.
Proceedings of the 2nd Social Media Mining for Health Research and Applications Workshop co-located with the American Medical Informatics Association Annual Symposium (AMIA 2017), 2017
2016
Toward automated e-cigarette surveillance: Spotting e-cigarette proponents on Twitter.
J. Biomed. Informatics, 2016
Knowledge-Based Biomedical Word Sense Disambiguation with Neural Concept Embeddings and Distant Supervision.
CoRR, 2016
Proceedings of the Social Informatics - 8th International Conference, 2016
Proceedings of the 7th ACM International Conference on Bioinformatics, 2016
On Interestingness Measures for Mining Statistically Significant and Novel Clinical Associations from EMRs.
Proceedings of the 7th ACM International Conference on Bioinformatics, 2016
Proceedings of the AMIA 2016, 2016
Proceedings of the AMIA 2016, 2016
Proceedings of the AMIA 2016, 2016
2015
J. Biomed. Informatics, 2015
An empirical evaluation of supervised learning approaches in assigning diagnosis codes to electronic medical records.
Artif. Intell. Medicine, 2015
Predicting Treatment Relations with Semantic Patterns over Biomedical Knowledge Graphs.
Proceedings of the Mining Intelligence and Knowledge Exploration, 2015
Analyzing the Moving Parts of a Large-Scale Multi-label Text Classification Pipeline: Experiences in Indexing Biomedical Articles.
Proceedings of the 2015 International Conference on Healthcare Informatics, 2015
Convolutional neural networks for biomedical text classification: application in indexing biomedical articles.
Proceedings of the 6th ACM Conference on Bioinformatics, 2015
Proceedings of the AMIA 2015, 2015
Proceedings of the Advances in Artificial Intelligence, 2015
2014
Using Common Table Expressions to Build a Scalable Boolean Query Generator for Clinical Data Warehouses.
IEEE J. Biomed. Health Informatics, 2014
Leveraging output term co-occurrence frequencies and latent associations in predicting medical subject headings.
Data Knowl. Eng., 2014
Proceedings of the AMIA 2014, 2014
2013
Unsupervised Medical Subject Heading Assignment Using Output Label Co-occurrence Statistics and Semantic Predications.
Proceedings of the Natural Language Processing and Information Systems, 2013
Proceedings of the 12th International Conference on Machine Learning and Applications, 2013
Supervised Extraction of Diagnosis Codes from EMRs: Role of Feature Selection, Data Selection, and Probabilistic Thresholding.
Proceedings of the IEEE International Conference on Healthcare Informatics, 2013
A Multi-Label Classification Approach for Coding Cancer Information Service Chat Transcripts.
Proceedings of the Twenty-Sixth International Florida Artificial Intelligence Research Society Conference, 2013
Unsupervised Extraction of Diagnosis Codes from EMRs Using Knowledge-Based and Extractive Text Summarization Techniques.
Proceedings of the Advances in Artificial Intelligence, 2013
2012
An up-to-date knowledge-based literature search and exploration framework for focused bioscience domains.
Proceedings of the ACM International Health Informatics Symposium, 2012
Proceedings of the COLING 2012, 2012
Improving Scalability and Performance of i2b2 Query Processing Using Common Table Expressions.
Proceedings of the AMIA 2012, 2012
2011
RASP: efficient multidimensional range query on attack-resilient encrypted databases.
Proceedings of the First ACM Conference on Data and Application Security and Privacy, 2011
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011
2009
Characterization of 2<sup><i>n</i></sup>-periodic binary sequences with fixed 2-error or 3-error linear complexity.
Des. Codes Cryptogr., 2009
Cryptogr. Commun., 2009
2008
Proceedings of the Sequences and Their Applications, 2008
Counting Functions for the <i>k</i>-Error Linear Complexity of 2<sup><i>n</i></sup>-Periodic Binary Sequences.
Proceedings of the Selected Areas in Cryptography, 15th International Workshop, SAC 2008, 2008
2007
Proceedings of the Progress in Cryptology, 2007