Bosheng Song

Chuanlong Hu

Antonio Ramírez-de-Arellano

Inf. Comput., 2025

Multilevel-evolutionary population P systems and applications in tumor segmentations.

[BibT_eX]

[DOI]

Appl. Soft Comput., 2025

Towards Synergistic Path-based Explanations for Knowledge Graph Completion: Exploration and Evaluation.

[BibT_eX]

[DOI]

Proceedings of the Thirteenth International Conference on Learning Representations, 2025

Multi-Objective Molecular Design Through Learning Latent Pareto Set.

[BibT_eX]

[DOI]

Proceedings of the AAAI-25, Sponsored by the Association for the Advancement of Artificial Intelligence, February 25, 2025

S²DN: Learning to Denoise Unconvincing Knowledge for Inductive Knowledge Graph Completion.

[BibT_eX]

[DOI]

Proceedings of the AAAI-25, Sponsored by the Association for the Advancement of Artificial Intelligence, February 25, 2025

2024

Learning to Denoise Biomedical Knowledge Graph for Robust Molecular Interaction Prediction.

[BibT_eX]

[DOI]

Patrick Cheong-Iao Pang

IEEE Trans. Knowl. Data Eng., December, 2024

PEB-DDI: A Task-Specific Dual-View Substructural Learning Framework for Drug-Drug Interaction Prediction.

[BibT_eX]

[DOI]

IEEE J. Biomed. Health Informatics, January, 2024

Dynamic threshold spiking neural P systems with weights and multiple channels.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2024

HANSynergy: Heterogeneous Graph Attention Network for Drug Synergy Prediction.

[BibT_eX]

[DOI]

J. Chem. Inf. Model., 2024

Deep synergetic spiking neural P systems for the overall survival time prediction of glioblastoma patients.

[BibT_eX]

[DOI]

Expert Syst. Appl., 2024

S<sup>2</sup>DN: Learning to Denoise Unconvincing Knowledge for Inductive Knowledge Graph Completion.

[BibT_eX]

[DOI]

CoRR, 2024

MaskMol: Knowledge-guided Molecular Image Pre-Training Framework for Activity Cliffs.

[BibT_eX]

[DOI]

CoRR, 2024

KGExplainer: Towards Exploring Connected Subgraph Explanations for Knowledge Graph Completion.

[BibT_eX]

[DOI]

CoRR, 2024

Attribute-guided prototype network for few-shot molecular property prediction.

[BibT_eX]

[DOI]

Briefings Bioinform., 2024

SSR-DTA: Substructure-aware multi-layer graph neural networks for drug-target binding affinity prediction.

[BibT_eX]

[DOI]

Artif. Intell. Medicine, 2024

2023

Hybrid neural-like P systems with evolutionary channels for multiple brain metastases segmentation.

[BibT_eX]

[DOI]

Pattern Recognit., October, 2023

Tissue P Systems With States in Cells.

[BibT_eX]

[DOI]

IEEE Trans. Computers, September, 2023

Prediction of multi-relational drug-gene interaction via Dynamic hyperGraph Contrastive Learning.

[BibT_eX]

[DOI]

Briefings Bioinform., September, 2023

Sequence Alignment/Map format: a comprehensive review of approaches and applications.

[BibT_eX]

[DOI]

Briefings Bioinform., September, 2023

Spiking neural P systems with weights and delays on synapses.

[BibT_eX]

[DOI]

Yanyan Li

Theor. Comput. Sci., August, 2023

KG-MTL: Knowledge Graph Enhanced Multi-Task Learning for Molecular Interaction.

[BibT_eX]

[DOI]

IEEE Trans. Knowl. Data Eng., July, 2023

Comprehensive evaluation of deep and graph learning on drug-drug interactions prediction.

[BibT_eX]

[DOI]

Briefings Bioinform., July, 2023

Spiking neural P system with synaptic vesicles and applications in multiple brain metastasis segmentation.

[BibT_eX]

[DOI]

Inf. Sci., May, 2023

Dimensionality reduction and visualization of single-cell RNA-seq data with an improved deep variational autoencoder.

[BibT_eX]

[DOI]

Briefings Bioinform., May, 2023

Hypergraph-Based Numerical Neural-Like P Systems for Medical Image Segmentation.

[BibT_eX]

[DOI]

IEEE Trans. Parallel Distributed Syst., April, 2023

Tissue P systems with evolutional communication rules with two objects in the left-hand side.

[BibT_eX]

[DOI]

Nat. Comput., March, 2023

Monodirectional evolutional symport tissue P systems with channel states and cell division.

[BibT_eX]

[DOI]

Claudio Zandron

Sci. China Inf. Sci., March, 2023

On the computational efficiency of tissue P systems with evolutional symport/antiport rules.

[BibT_eX]

[DOI]

Claudio Zandron

Knowl. Based Syst., February, 2023

Modality-DTA: Multimodality Fusion Strategy for Drug-Target Affinity Prediction.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

Learning to Denoise Unreliable Interactions for Link Prediction on Biomedical Knowledge Graph.

[BibT_eX]

[DOI]

Patrick Cheong-lao Pang

CoRR, 2023

2022

Monodirectional Evolutional Symport Tissue P Systems With Promoters and Cell Division.

[BibT_eX]

[DOI]

IEEE Trans. Parallel Distributed Syst., 2022

Rule synchronization for monodirectional tissue-like P systems with channel states.

[BibT_eX]

[DOI]

Yanyan Li

Inf. Comput., 2022

A Survey of Nature-Inspired Computing: Membrane Computing.

[BibT_eX]

[DOI]

Ignacio Pérez-Hurtado

ACM Comput. Surv., 2022

Predicting ncRNA-protein interactions based on dual graph convolutional network and pairwise learning.

[BibT_eX]

[DOI]

Briefings Bioinform., 2022

Learning spatial structures of proteins improves protein-protein interaction prediction.

[BibT_eX]

[DOI]

Briefings Bioinform., 2022

2021

Monodirectional Tissue P Systems With Promoters.

[BibT_eX]

[DOI]

Min Jiang

IEEE Trans. Cybern., 2021

Solving a PSPACE-complete problem by symport/antiport P systems with promoters and membrane division.

[BibT_eX]

[DOI]

J. Membr. Comput., 2021

Monodirectional tissue P systems with channel states.

[BibT_eX]

[DOI]

Alfonso Rodríguez-Patón

Inf. Sci., 2021

Rule synchronization for tissue P systems.

[BibT_eX]

[DOI]

Inf. Comput., 2021

The computational power of monodirectional tissue P systems with symport rules.

[BibT_eX]

[DOI]

Shengye Huang

Inf. Comput., 2021

Time-free Solution to Independent Set Problem using P Systems with Active Membranes.

[BibT_eX]

[DOI]

Fundam. Informaticae, 2021

Tuning Frontiers of Efficiency in Tissue P Systems with Evolutional Communication Rules.

[BibT_eX]

[DOI]

Complex., 2021

MUFFIN: multi-scale feature fusion for drug-drug interaction prediction.

[BibT_eX]

[DOI]

Bioinform., 2021

Deep learning methods for biomedical named entity recognition: a survey and qualitative comparison.

[BibT_eX]

[DOI]

Briefings Bioinform., 2021

Molecular design in drug discovery: a comprehensive review of deep generative models.

[BibT_eX]

[DOI]

Briefings Bioinform., 2021

2020

Cell-like P systems with polarizations and minimal rules.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2020

P systems with symport/antiport rules: When do the surroundings matter?

[BibT_eX]

[DOI]

Miguel Ángel Martínez-del-Amor

Theor. Comput. Sci., 2020

Time-freeness and clock-freeness and related concepts in P systems.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2020

Tissue P systems with promoter simulation with MeCoSim and P-Lingua framework.

[BibT_eX]

[DOI]

J. Membr. Comput., 2020

The computational power of cell-like P systems with one protein on membrane.

[BibT_eX]

[DOI]

Xiaoyan Luo

J. Membr. Comput., 2020

Cell-like P systems with evolutional symport/antiport rules and membrane creation.

[BibT_eX]

[DOI]

Inf. Comput., 2020

P Systems with Rule Production and Removal.

[BibT_eX]

[DOI]

Fundam. Informaticae, 2020

2018

Language generating alphabetic flat splicing P systems.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2018

On Distributed Solution to SAT by Membrane Computing.

[BibT_eX]

[DOI]

Henry N. Adorna

Int. J. Comput. Commun. Control, 2018

The Computational Complexity of Tissue P Systems with Evolutional Symport/Antiport Rules.

[BibT_eX]

[DOI]

Complex., 2018

On Languages Generated by Context-Free Matrix Insertion-Deletion Systems with Exo-Operations.

[BibT_eX]

[DOI]

Fei Xu

Proceedings of the Enjoying Natural Computing, 2018

An Overview of 2D Picture Array Generating Models Based on Membrane Computing.

[BibT_eX]

[DOI]

Proceedings of the Reversibility and Universality, 2018

2017

A time-free uniform solution to subset sum problem by tissue P systems with cell division.

[BibT_eX]

[DOI]

Tao Song

Math. Struct. Comput. Sci., 2017

Tissue-like P systems with evolutional symport/antiport rules.

[BibT_eX]

[DOI]

Cheng Zhang

Inf. Sci., 2017

An efficient time-free solution to QSAT problem using P systems with proteins on membranes.

[BibT_eX]

[DOI]

Inf. Comput., 2017

Tissue P Systems with Rule Production/Removal.

[BibT_eX]

[DOI]

Gexiang Zhang

Proceedings of the Membrane Computing, 2017

Simulating Evolutional Symport/Antiport by Evolution-Communication and vice versa in Tissue P Systems with Parallel Communication.

[BibT_eX]

[DOI]

Proceedings of the Membrane Computing, 2017

Derivation Languages of Splicing P Systems.

[BibT_eX]

[DOI]

Proceedings of the Bio-inspired Computing: Theories and Applications, 2017

2016

The computational power of tissue-like P systems with promoters.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2016

Flat maximal parallelism in P systems with promoters.

[BibT_eX]

[DOI]

Gheorghe Paun

Theor. Comput. Sci., 2016

An efficient time-free solution to SAT problem by P systems with proteins on membranes.

[BibT_eX]

[DOI]

J. Comput. Syst. Sci., 2016

Tissue P Systems with Protein on Cells.

[BibT_eX]

[DOI]

Fundam. Informaticae, 2016

Membrane fission: A computational complexity perspective.

[BibT_eX]

[DOI]

Luis F. Macías-Ramos

Complex., 2016

Rewriting P Systems with Flat-Splicing Rules.

[BibT_eX]

[DOI]

K. G. Subramanian

Proceedings of the Membrane Computing - 17th International Conference, CMC 2016, Milan, 2016

An Improved Algorithm for Constructing Binary Trees Using the Traversal Sequences.

[BibT_eX]

[DOI]

Proceedings of the Bio-inspired Computing - Theories and Applications, 2016

Improved Multi-step Iterative Algorithms for the Fixed Points of Strongly Pseudo-Contractive Mappings.

[BibT_eX]

[DOI]

Proceedings of the Bio-inspired Computing - Theories and Applications, 2016

A Multi-objective Optimization Algorithm Based on Tissue P System for VRPTW.

[BibT_eX]

[DOI]

Proceedings of the Bio-inspired Computing - Theories and Applications, 2016

Matrix Flat Splicing Systems.

[BibT_eX]

[DOI]

Proceedings of the Bio-inspired Computing - Theories and Applications, 2016

2015

Computational efficiency and universality of timed P systems with active membranes.

[BibT_eX]

[DOI]

Theor. Comput. Sci., 2015

Computational efficiency and universality of timed P systems with membrane creation.

[BibT_eX]

[DOI]

Soft Comput., 2015

Time-free solution to SAT problem by P systems with active membranes and standard cell division rules.

[BibT_eX]

[DOI]

Tao Song

Nat. Comput., 2015

A P_Lingua Based Simulator for P Systems with Symport/Antiport Rules.

[BibT_eX]

[DOI]

Luis F. Macías-Ramos

Tao Song

Fundam. Informaticae, 2015

Efficient solutions to hard computational problems by P systems with symport/antiport rules and membrane division.

[BibT_eX]

[DOI]

Biosyst., 2015

2011

DNA Self-assembly Model for Matrix Addition Problem.

[BibT_eX]

[DOI]

Zhixiang Yin

J. Comput., 2011

2010

Plasmid DNA computing model of 0-1 programming problem.

[BibT_eX]

[DOI]

Zhixiang Yin

Hua Chen