Charles Girardot

According to our database, Charles Girardot authored at least 8 papers between 2007 and 2017.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2017

Dynamix: dynamic visualization by automatic selection of informative tracks from hundreds of genomic datasets.

Matthias Monfort, Eileen E. M. Furlong, Charles Girardot

Bioinform., 2017

2016

Qualitative Dynamical Modelling Can Formally Explain Mesoderm Specification and Predict Novel Developmental Phenotypes.

Abibatou Mbodj, Eleanor Hilary Gustafson, Lucia Ciglar, Guillaume Junion, Aitor González, Charles Girardot, Laurent Perrin, Eileen E. M. Furlong, Denis Thieffry

PLoS Comput. Biol., 2016

Je, a versatile suite to handle multiplexed NGS libraries with unique molecular identifiers.

Charles Girardot, Jelle Scholtalbers, Sajoscha Sauer, Shu-Yi Su, Eileen E. M. Furlong

BMC Bioinform., 2016

2012

Déchiffrement de l'activité des séquences cis-régulatrices chez la Drosophile basé sur la localisation des facteurs de transcription et la caractérisation de l'état de la chromatine. (Deciphering enhancer activity in Drosophila based on transcription factor occupancy and chromatin state chromatin state characterization).

Charles Girardot

PhD thesis, 2012

2010

Model-based method for transcription factor target identification with limited data.

Antti Honkela, Charles Girardot, Eleanor Hilary Gustafson, Ya-Hsin Liu, Eileen E. M. Furlong, Neil D. Lawrence, Magnus Rattray

Proc. Natl. Acad. Sci. USA, 2010

2008

4D<i>Xpress</i>: a database for cross-species expression pattern comparisons.

Yannick Haudry, Hugo Bérubé, Ivica Letunic, Paul-Daniel Weeber, Julien Gagneur, Charles Girardot, Misha Kapushesky, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen E. M. Furlong, Joachim Wittbrodt, Thorsten Henrich

Nucleic Acids Res., 2008

Comparing and Analysing Gene Expression Patterns Across Animal Species Using 4DXpress.

Yannick Haudry, Chuang Kee Ong, Laurence Ettwiller, Hugo Bérubé, Ivica Letunic, Misha Kapushesky, Paul-Daniel Weeber, Xi Wang, Julien Gagneur, Charles Girardot, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen E. M. Furlong, Joachim Wittbrodt, Thorsten Henrich

Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2008

2007

CoCo: a web application to display, store and curate ChIP-on-chip data integrated with diverse types of gene expression data.

Charles Girardot, Oleg Sklyar, Sophie Grosz, Wolfgang Huber, Eileen E. M. Furlong

Bioinform., 2007