Wolfgang Huber

According to our database1, Wolfgang Huber authored at least 45 papers between 1991 and 2022.

Collaborative distances:



In proceedings 
PhD thesis 


On csauthors.net:


Inferring tumor-specific cancer dependencies through integrating ex vivo drug response assays and drug-protein profiling.
PLoS Comput. Biol., 2022

MatrixQCvis: shiny-based interactive data quality exploration for omics data.
Bioinform., 2022

glmGamPoi: fitting Gamma-Poisson generalized linear models on single cell count data.
Bioinform., 2021

Expression Atlas: gene and protein expression across multiple studies and organisms.
Nucleic Acids Res., 2018

Expression Atlas update - an integrated database of gene and protein expression in humans, animals and plants.
Nucleic Acids Res., 2016

FourCSeq: analysis of 4C sequencing data.
Bioinform., 2015

SomaticSignatures: inferring mutational signatures from single-nucleotide variants.
Bioinform., 2015

HTSeq - a Python framework to work with high-throughput sequencing data.
Bioinform., 2015

Expression Atlas update - a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments.
Nucleic Acids Res., 2014

h5vc: scalable nucleotide tallies with HDF5.
Bioinform., 2014

Software for Computing and Annotating Genomic Ranges.
PLoS Comput. Biol., 2013

Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay.
BMC Bioinform., 2013

Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size.
Bioinform., 2013

CellH5: a format for data exchange in high-content screening.
Bioinform., 2013

R Language.
Proceedings of the International Encyclopedia of Statistical Science, 2011

Assessments of Affymetrix GeneChip Microarray Quality for Laboratories and Single Samples.
BMC Bioinform., 2011

Extracting quantitative genetic interaction phenotypes from matrix combinatorial RNAi.
BMC Bioinform., 2011

EBImage - an R package for image processing with applications to cellular phenotypes.
Bioinform., 2010

The hwriter package: Composing HTML documents with R objects.
R J., 2009

Importing ArrayExpress datasets into R/Bioconductor.
Bioinform., 2009

arrayQualityMetrics - a bioconductor package for quality assessment of microarray data.
Bioinform., 2009

Array-based genotyping in <i>S.cerevisiae</i> using semi-supervised clustering.
Bioinform., 2009

Analyzing ChIP-chip Data Using Bioconductor.
PLoS Comput. Biol., 2008

Estimating node degree in bait-prey graphs.
Bioinform., 2008

Rintact: enabling computational analysis of molecular interaction data from the IntAct repository.
Bioinform., 2008

Ringo - an R/Bioconductor package for analyzing ChIP-chip readouts.
BMC Bioinform., 2007

Ringo - an R/Bioconductor package for analyzing ChIP-chip readouts.
BMC Bioinform., 2007

Graphs in molecular biology.
BMC Bioinform., 2007

In situ analysis of cross-hybridisation on microarrays and the inference of expression correlation.
BMC Bioinform., 2007

CoCo: a web application to display, store and curate ChIP-on-chip data integrated with diverse types of gene expression data.
Bioinform., 2007

The LIFEdb database in 2006.
Nucleic Acids Res., 2006

Transcript mapping with high-density oligonucleotide tiling arrays.
Bioinform., 2006

BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis.
Bioinform., 2005

arrayMagic: two-colour cDNA microarray quality control, preprocessing.
Bioinform., 2005

matchprobes: a Bioconductor package for the sequence-matching of microarray probe elements.
Bioinform., 2004

Towards a Rapid Prototyping Framework for Architecture Exploration in Embedded Systems.
Proceedings of the Second Workshop on Intelligent Solutions in Embedded Systems, 2004

Reproducible Statistical Analysis in Microarray Profiling Studies.
Proceedings of the Applied Parallel Computing, 2004

Interference minimizing bandwidth guaranteed on-line routing algorithm for traffic engineering.
Proceedings of the 12th IEEE International Conference on Networks, 2004

Processor Support for Temporal Predictability - The SPEAR Design Example.
Proceedings of the 15th Euromicro Conference on Real-Time Systems (ECRTS 2003), 2003

Variance stabilization applied to microarray data calibration and to the quantification of differential expression.
Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, 2002

Variance Stabilization and Robust Normalization for Microarray Gene Expression Data.
Proceedings of the COMPSTAT 2002, 2002

FLASHFLOOD: A 3D Field-based similarity search and alignment method for flexible molecules.
J. Comput. Aided Mol. Des., 2001

Identifying splits with clear separation: a new class discovery method for gene expression data.
Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, 2001

The three-loop model: a neural network for the generation of saccadic reaction times.
Biol. Cybern., 1995

Die EG-Politik im Bereich des Informationsmarktes.
Proceedings of the Wissensbasierte Informationssysteme und Informationsmanagement: Proceedings des 2. Internationalen Symposiums für Informationswissenschaft, 1991