Christoph Dieterich

According to our database, Christoph Dieterich authored at least 36 papers between 2002 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Clinical information extraction for Low-resource languages with Few-shot learning using Pre-trained language models and Prompting.

Phillip Richter-Pechanski, Philipp Wiesenbach, Dominic M. Schwab, Christina Kiriakou, Nicolas Geis, Christoph Dieterich, Anette Frank

CoRR, 2024

2023

Characterizing alternative splicing effects on protein interaction networks with LINDA.

Enio Gjerga, Isabel S. Naarmann-de Vries, Christoph Dieterich

Bioinform., 2023

Few-Shot and Prompt Training for Text Classification in German Doctor's Letters.

Phillip Richter-Pechanski, Philipp Wiesenbach, Dominic M. Schwab, Christina Kiriakou, Mingyang He, Nicolas A. Geis, Anette Frank, Christoph Dieterich

Proceedings of the Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of MIE 2023, Gothenburg, Sweden, 22, 2023

Insights into the FAIRness of the German Network University Medicine: A Survey.

Lea Michaelis, Rasim Atakan Poyraz, Michael Rusongoza Muzoora, Kerstin Gierend, Alexander Bartschke, Christoph Dieterich, Tim Johann, Dagmar Krefting, Dagmar Waltemath, Sylvia Thun

Proceedings of the Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of MIE 2023, Gothenburg, Sweden, 22, 2023

Herding Cats in Pandemic Times - Towards Technological and Organizational Convergence of Heterogeneous Solutions for Investigating and Mastering the Pandemic in University Medical Centers.

Dagmar Krefting, Nico T. Mutters, Rüdiger Pryss, Martin Sedlmayr, Martin Boeker, Christoph Dieterich, Carolin Koll, Martina Mueller, Anna Slagman, Dagmar Waltemath, Antje Wulff, Sven Zenker

Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

2021

A comparison of metabolic labeling and statistical methods to infer genome-wide dynamics of RNA turnover.

Etienne Boileau, Janine Altmüller, Isabel S. Naarmann-de Vries, Christoph Dieterich

Briefings Bioinform., 2021

An Apple Watch Dashboard for HiGHmed Heart Insufficency Patients.

Magdalena Smieszek, Aljoscha Kindermann, Ali Amr, Benjamin Meder, Christoph Dieterich

Proceedings of the German Medical Data Sciences 2021: Digital Medicine: Recognize - Understand - Heal - Proceedings of the Joint Conference of the 66th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) and the 13th Annual Meeting of the TMF, 2021

2020

Preliminary Analysis of Structured Reporting in the HiGHmed Use Case Cardiology: Challenges and Measures.

Aljoscha Kindermann, Erik Tute, Sebastian Benda, Martin Löpprich, Phillip Richter-Pechanski, Christoph Dieterich

Proceedings of the German Medical Data Sciences: Bringing Data to Life - Proceedings of the Joint Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) and the Central European Network, 2020

2019

On the optimal design of metabolic RNA labeling experiments.

Alexey Uvarovskii, Isabel S. Naarmann-de Vries, Christoph Dieterich

PLoS Comput. Biol., 2019

circtools - a one-stop software solution for circular RNA research.

Tobias Jakobi, Alexey Uvarovskii, Christoph Dieterich

Bioinform., 2019

Deep Learning Approaches Outperform Conventional Strategies in De-Identification of German Medical Reports.

Phillip Richter-Pechanski, Ali Amr, Hugo A. Katus, Christoph Dieterich

Proceedings of the German Medical Data Sciences: Shaping Change - Creative Solutions for Innovative Medicine - Proceedings of the 64th Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) 2019 in Dortmund, Germany, 2019

MedEx - Data Analytics for Medical Domain Experts in Real-Time.

Aljoscha Kindermann, Ekaterina Stepanova, Hauke Hund, Nicolas Geis, Brandon Malone, Christoph Dieterich

Proceedings of the German Medical Data Sciences: Shaping Change - Creative Solutions for Innovative Medicine - Proceedings of the 64th Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) 2019 in Dortmund, Germany, 2019

2018

De-Identification of German Medical Admission Notes.

Phillip Richter-Pechanski, Stefan Riezler, Christoph Dieterich

Proceedings of the German Medical Data Sciences: A Learning Healthcare System, 2018

2017

JACUSA: site-specific identification of RNA editing events from replicate sequencing data.

Michael Piechotta, Emanuel Wyler, Uwe Ohler, Markus Landthaler, Christoph Dieterich

BMC Bioinform., 2017

pulseR: Versatile computational analysis of RNA turnover from metabolic labeling experiments.

Alexey Uvarovskii, Christoph Dieterich

Bioinform., 2017

Flexbar 3.0 - SIMD and multicore parallelization.

Johannes T. Roehr, Christoph Dieterich, Knut Reinert

Bioinform., 2017

2016

Profiling and Validation of the Circular RNA Repertoire in Adult Murine Hearts.

Tobias Jakobi, Lisa F. Czaja-Hasse, Richard Reinhardt, Christoph Dieterich

Genom. Proteom. Bioinform., 2016

Specific identification and quantification of circular RNAs from sequencing data.

Jun Cheng, Franziska Metge, Christoph Dieterich

Bioinform., 2016

2015

DoRiNA 2.0 - upgrading the doRiNA database of RNA interactions in post-transcriptional regulation.

Kai Blin, Christoph Dieterich, Ricardo Wurmus, Nikolaus Rajewsky, Markus Landthaler, Altuna Akalin

Nucleic Acids Res., 2015

2014

Detection of active transcription factor binding sites with the combination of DNase hypersensitivity and histone modifications.

Eduardo G. Gusmão, Christoph Dieterich, Martin Zenke, Ivan G. Costa

Bioinform., 2014

2013

ACCUSA2: multi-purpose SNV calling enhanced by probabilistic integration of quality scores.

Michael Piechotta, Christoph Dieterich

Bioinform., 2013

2012

doRiNA: a database of RNA interactions in post-transcriptional regulation.

Gerd Anders, Sebastian D. Mackowiak, Marvin Jens, Jonas Maaskola, Andreas Kuntzagk, Nikolaus Rajewsky, Markus Landthaler, Christoph Dieterich

Nucleic Acids Res., 2012

Prediction of Transcription Factor Binding Sites by Integrating DNase Digestion and Histone Modification.

Eduardo G. Gusmão, Christoph Dieterich, Ivan G. Costa

Proceedings of the Advances in Bioinformatics and Computational Biology, 2012

2010

ACCUSA - accurate SNP calling on draft genomes.

Sebastian Fröhler, Christoph Dieterich

Bioinform., 2010

2008

Syntenator: Multiple gene order alignments with a gene-specific scoring function.

Christian Rödelsperger, Christoph Dieterich

Algorithms Mol. Biol., 2008

2007

Pristionchus.org: a genome-centric database of the nematode satellite species <i>Pristionchus pacificus</i>.

Christoph Dieterich, Waltraud Roeseler, Patrick Sobetzko, Ralf J. Sommer

Nucleic Acids Res., 2007

Developments in CORG: a gene-centric comparative genomics resource.

Christoph Dieterich, M. W. Franz, Martin Vingron

Nucleic Acids Res., 2007

Two Graph-based Approaches for Finding Cross-species Conserved Gene Orders.

Christian Rödelsperger, Christoph Dieterich

Proceedings of the German Conference on Bioinformatics, 2007

2005

Ab initio identification of putative human transcription factor binding sites by comparative genomics.

Davide Corà, Carl Herrmann, Christoph Dieterich, Ferdinando Di Cunto, Paolo Provero, Michele Caselle

BMC Bioinform., 2005

SITEBLAST-rapid and sensitive local alignment of genomic sequences employing motif anchors.

Morris Michael, Christoph Dieterich, Martin Vingron

Bioinform., 2005

2004

Suboptimal Local Alignments Across Multiple Scoring Schemes.

Morris Michael, Christoph Dieterich, Jens Stoye

Proceedings of the Algorithms in Bioinformatics, 4th International Workshop, 2004

Detecting Functional Modules of Transcription Factor Binding Sites in the Human Genome.

Thomas Manke, Christoph Dieterich, Martin Vingron

Proceedings of the Regulatory Genomics, 2004

Functional inference from non-random distributions of conserved predicted transcription factor binding sites.

Christoph Dieterich, Sven Rahmann, Martin Vingron

Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004

2003

CORG: a database for COmparative Regulatory Genomics.

Christoph Dieterich, Haiyan Wang, Katja Rateitschak, Hannes Luz, Martin Vingron

Nucleic Acids Res., 2003

Exploring potential target genes of signaling pathways by predicting conserved transcription factor binding sites.

Christoph Dieterich, Ralf Herwig, Martin Vingron

Proceedings of the European Conference on Computational Biology (ECCB 2003), 2003

2002

Annotating regulatory DNA based on man-mouse genomic comparison.

Christoph Dieterich, Brian Cusack, Haiyan Wang, Katja Rateitschak, Antje Krause, Martin Vingron

Proceedings of the European Conference on Computational Biology (ECCB 2002), 2002