Sven Rahmann
Orcid: 0000-0002-8536-6065Affiliations:
- Technical University of Dortmund, Germany
According to our database1,
Sven Rahmann
authored at least 87 papers
between 2000 and 2022.
Collaborative distances:
Collaborative distances:
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Online presence:
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on zbmath.org
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on orcid.org
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on d-nb.info
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on dl.acm.org
On csauthors.net:
Bibliography
2022
Proceedings of the 22nd International Workshop on Algorithms in Bioinformatics, 2022
Proceedings of the Machine Learning under Resource Constraints - Volume 3: Applications, 2022
Proceedings of the Machine Learning under Resource Constraints - Volume 3: Applications, 2022
2021
GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data.
Bioinform., 2021
2020
wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data.
BMC Bioinform., 2020
Proceedings of the 18th International Symposium on Experimental Algorithms, 2020
Cost-optimal assignment of elements in genome-scale multi-way bucketed Cuckoo hash tables.
Proceedings of the Symposium on Algorithm Engineering and Experiments, 2020
2019
Proceedings of the Similarity Search and Applications - 12th International Conference, 2019
2018
Spalter: A Meta Machine Learning Approach to Distinguish True DNA Variants from Sequencing Artefacts.
Proceedings of the 18th International Workshop on Algorithms in Bioinformatics, 2018
2017
A hybrid parameter estimation algorithm for beta mixtures and applications to methylation state classification.
Algorithms Mol. Biol., 2017
Proceedings of the 17th International Workshop on Algorithms in Bioinformatics, 2017
2016
2015
PeerJ Prepr., 2015
PeerJ Prepr., 2015
An optimization approach to detect differentially methylated regions from Whole Genome Bisulfite Sequencing data.
PeerJ Prepr., 2015
Algorithms Mol. Biol., 2015
2014
Using the Expectation Maximization Algorithm with Heterogeneous Mixture Components for the Analysis of Spectrometry Data.
CoRR, 2014
A modular computational framework for automated peak extraction from ion mobility spectra.
BMC Bioinform., 2014
2013
Proceedings of the German Conference on Bioinformatics 2013, 2013
Proceedings of the German Conference on Bioinformatics 2013, 2013
2012
IEEE ACM Trans. Comput. Biol. Bioinform., 2012
Proceedings of the German Conference on Bioinformatics 2012, 2012
Designing q-Unique DNA Sequences with Integer Linear Programs and Euler Tours in De Bruijn Graphs.
Proceedings of the German Conference on Bioinformatics 2012, 2012
Proceedings of the 20th European Signal Processing Conference, 2012
Proceedings of the 14th Meeting on Algorithm Engineering & Experiments, 2012
2011
Extension and Robustness of Transitivity Clustering for Protein-Protein Interaction Network Analysis.
Internet Math., 2011
Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling.
BMC Bioinform., 2011
An Algorithm to Compute the Character Access Count Distribution for Pattern Matching Algorithms.
Algorithms, 2011
2010
Efficient Online Transcription Factor Binding Site Adjustment by Integrating Transitive Graph Projection with MoRAine 2.0.
J. Integr. Bioinform., 2010
CoRR, 2010
Proceedings of the Algorithms in Bioinformatics, 10th International Workshop, 2010
Exact Analysis of Horspool's and Sunday's Pattern Matching Algorithms with Probabilistic Arithmetic Automata.
Proceedings of the Language and Automata Theory and Applications, 2010
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010
2009
Reliable transfer of transcriptional gene regulatory networks between taxonomically related organisms.
BMC Syst. Biol., 2009
Towards the integrated analysis, visualization and reconstruction of microbial gene regulatory networks.
Briefings Bioinform., 2009
Proceedings of the Genetic and Evolutionary Computation Conference, 2009
2008
MoRAine - A web server for fast computational transcription factor binding motif re-annotation.
J. Integr. Bioinform., 2008
Compound Poisson Approximation of the Number of Occurrences of a Position Frequency Matrix (PFM) on Both Strands.
J. Comput. Biol., 2008
J. Bioinform. Comput. Biol., 2008
Natural similarity measures between position frequency matrices with an application to clustering.
Bioinform., 2008
Proceedings of the Algorithms in Bioinformatics, 8th International Workshop, 2008
Probabilistic Arithmetic Automata and Their Application to Pattern Matching Statistics.
Proceedings of the Combinatorial Pattern Matching, 19th Annual Symposium, 2008
Proceedings of the Computing and Combinatorics, 14th Annual International Conference, 2008
2007
IMS2 - An integrated medical software system for early lung cancer detection using ion mobility spectrometry data of human breath.
J. Integr. Bioinform., 2007
Discret. Appl. Math., 2007
CoryneCenter - An online resource for the integrated analysis of corynebacterial genome and transcriptome data.
BMC Syst. Biol., 2007
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing.
BMC Bioinform., 2007
2006
CoryneRegNet 2: An Integrative Bioinformatics Approach for Reconstruction and Comparison of Transcriptional Regulatory Networks in Prokaryotes.
J. Integr. Bioinform., 2006
Proceedings of the Algorithms in Bioinformatics, 6th International Workshop, 2006
Proceedings of the Algorithms in Bioinformatics, 6th International Workshop, 2006
Markov Additive Chains and Applications to Fragment Statistics for Peptide Mass Fingerprinting.
Proceedings of the Systems Biology and Computational Proteomics, 2006
Decoding non-unique oligonucleotide hybridization experiments of targets related by a phylogenetic tree.
Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006
Proceedings of the Advances in Data Analysis, 2006
Proceedings of the German Conference on Bioinformatics GCB 2006, 19.09. 2006, 2006
Subsequence Combinatorics and Applications to Microarray Production, DNA Sequencing and Chaining Algorithms.
Proceedings of the Combinatorial Pattern Matching, 17th Annual Symposium, 2006
2005
Nucleic Acids Res., 2005
Proceedings of the 2005 ACM Symposium on Applied Computing (SAC), 2005
2004
Mean and variance of the Gibbs free energy of oligonucleotides in the nearest neighbor model under varying conditions.
Bioinform., 2004
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004
Functional inference from non-random distributions of conserved predicted transcription factor binding sites.
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004
Proceedings of the Ausgezeichnete Informatikdissertationen 2004, 2004
Algorithms for probe selection and DNA microarray design.
PhD thesis, 2004
2003
J. Bioinform. Comput. Biol., 2003
Comb. Probab. Comput., 2003
Dynamic Programming Algorithms for Two Statistical Problems in Computational Biology.
Proceedings of the Algorithms in Bioinformatics, Third International Workshop, 2003
Robust estimation of the phylogeny of Chlorophyceae(Chlorophyta)based on profile distances.
Proceedings of the German Conference on Bioinformatics, 2003
The shortest common supersequence problem in a microarray production setting.
Proceedings of the European Conference on Computational Biology (ECCB 2003), 2003
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003
2002
Proceedings of the 1st IEEE Computer Society Bioinformatics Conference, 2002
2001
Non-symmetric score matrices and the detection of homologous transmembrane proteins.
Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, 2001
2000
Exact and Efficient Computation of the Expected Number of Missing and Common Words in Random Texts.
Proceedings of the Combinatorial Pattern Matching, 11th Annual Symposium, 2000