Clémence Frioux

According to our database, Clémence Frioux authored at least 8 papers between 2017 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Seed2LP: seed inference in metabolic networks for reverse ecology applications.

Chabname Ghassemi Nedjad, Mathieu Bolteau, Lucas Bourneuf, Loïc Paulevé, Clémence Frioux

Bioinform., 2025

Mapler: a pipeline for assessing assembly quality in taxonomically rich metagenomes sequenced with HiFi reads.

Nicolas Maurice, Claire Lemaitre, Riccardo Vicedomini, Clémence Frioux

Bioinform., 2025

Seed Inference in Interacting Microbial Communities Using Combinatorial Optimization.

Chabname Ghassemi Nedjad, Sebastián Nelson Mendoza, Clémence Frioux, Loïc Paulevé

Proceedings of the Computational Methods in Systems Biology, 2025

2018

Investigating host-microbiota cooperation with gap-filling optimization problems. (Étude de la coopération hôte-microbiote par des problèmes d'optimisation basés sur la complétion de réseaux métaboliques).

Clémence Frioux

PhD thesis, 2018

Traceability, reproducibility and wiki-exploration for "à-la-carte" reconstructions of genome-scale metabolic models.

Méziane Aite, Marie Chevallier, Clémence Frioux, Camille Trottier, Jeanne Got, María Paz Cortés, Sebastián Nelson Mendoza, Grégory Carrier, Olivier Dameron, Nicolas Guillaudeux, Mauricio Latorre, Nicolás Loira, Gabriel V. Markov, Alejandro Maass, Anne Siegel

PLoS Comput. Biol., 2018

Scalable and exhaustive screening of metabolic functions carried out by microbial consortia.

Clémence Frioux, Enora Fremy, Camille Trottier, Anne Siegel

Bioinform., 2018

2017

Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks.

Sylvain Prigent, Clémence Frioux, Simon M. Dittami, Sven Thiele, Abdelhalim Larhlimi, Guillaume Collet, Fabien Gutknecht, Jeanne Got, Damien Eveillard, Jérémie Bourdon, Frédéric Plewniak, Thierry Tonon, Anne Siegel

PLoS Comput. Biol., 2017

Hybrid Metabolic Network Completion.

Clémence Frioux, Torsten Schaub, Sebastian Schellhorn, Anne Siegel, Philipp Wanko

Proceedings of the Logic Programming and Nonmonotonic Reasoning, 2017