Claire Lemaitre

According to our database, Claire Lemaitre authored at least 20 papers between 2008 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Mapler: a pipeline for assessing assembly quality in taxonomically rich metagenomes sequenced with HiFi reads.

Nicolas Maurice, Claire Lemaitre, Riccardo Vicedomini, Clémence Frioux

Bioinform., 2025

Pairwise graph edit distance characterizes the impact of the construction method on pangenome graphs.

Siegfried Dubois, Matthias Zytnicki, Claire Lemaitre, Thomas Faraut

Bioinform., 2025

2023

MTG-Link: leveraging barcode information from linked-reads to assemble specific loci.

Anne Guichard, Fabrice Legeai, Denis Tagu, Claire Lemaitre

BMC Bioinform., December, 2023

SVJedi-graph: improving the genotyping of close and overlapping structural variants with long reads using a variation graph.

Sandra Romain, Claire Lemaitre

Bioinform., 2023

2021

Méthodes bioinformatiques pour l'étude des Variants de Structure avec des données de séquençages génomiques.

Claire Lemaitre

, 2021

2020

SVJedi: genotyping structural variations with long reads.

Lolita Lecompte, Pierre Peterlongo, Dominique Lavenier, Claire Lemaitre

Bioinform., 2020

SimkaMin: fast and resource frugal de novo comparative metagenomics.

Gaëtan Benoit, Mahendra Mariadassou, Stéphane Robin, Sophie Schbath, Pierre Peterlongo, Claire Lemaitre

Bioinform., 2020

2017

De Novo NGS Data Compression.

Gaëtan Benoit, Claire Lemaitre, Guillaume Rizk, Erwan Drezen, Dominique Lavenier

Proceedings of the Algorithms for Next-Generation Sequencing Data, Techniques, 2017

2016

Multiple comparative metagenomics using multiset <i>k</i>-mer counting.

Gaëtan Benoit, Pierre Peterlongo, Mahendra Mariadassou, Erwan Drezen, Sophie Schbath, Dominique Lavenier, Claire Lemaitre

PeerJ Comput. Sci., 2016

2015

Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph.

Gaëtan Benoit, Claire Lemaitre, Dominique Lavenier, Erwan Drezen, Thibault Dayris, Raluca Uricaru, Guillaume Rizk

BMC Bioinform., 2015

2014

Compression of high throughput sequencing data with probabilistic de Bruijn graph.

Gaëtan Benoit, Claire Lemaitre, Dominique Lavenier, Guillaume Rizk

CoRR, 2014

MindTheGap: integrated detection and assembly of short and long insertions.

Guillaume Rizk, Anaïs Gouin, Rayan Chikhi, Claire Lemaitre

Bioinform., 2014

GATB: Genome Assembly & Analysis Tool Box.

Erwan Drezen, Guillaume Rizk, Rayan Chikhi, Charles Deltel, Claire Lemaitre, Pierre Peterlongo, Dominique Lavenier

Bioinform., 2014

Mapping-Free and Assembly-Free Discovery of Inversion Breakpoints from Raw NGS Reads.

Claire Lemaitre, Liviu Ciortuz, Pierre Peterlongo

Proceedings of the Algorithms for Computational Biology - First International Conference, 2014

2012

Compareads: comparing huge metagenomic experiments.

Nicolas Maillet, Claire Lemaitre, Rayan Chikhi, Dominique Lavenier, Pierre Peterlongo

BMC Bioinform., 2012

2011

A novel substitution matrix fitted to the compositional bias in Mollicutes improves the prediction of homologous relationships.

Claire Lemaitre, Aurélien Barré, Christine Citti, Florence Tardy, Francois Thiaucourt, Pascal Sirand-Pugnet, Patricia Thébault

BMC Bioinform., 2011

2010

Cassis: detection of genomic rearrangement breakpoints.

Christian Baudet, Claire Lemaitre, Zanoni Dias, Christian Gautier, Eric Tannier, Marie-France Sagot

Bioinform., 2010

2008

Réarrangements chromosomiques dans les génomes de mammifères : caractérisation des points de cassure. (Chromosomal rearrangements in mammalian genomes : characterising the breakpoints).

Claire Lemaitre

PhD thesis, 2008

A small trip in the untranquil world of genomes: A survey on the detection and analysis of genome rearrangement breakpoints.

Claire Lemaitre, Marie-France Sagot

Theor. Comput. Sci., 2008

Precise detection of rearrangement breakpoints in mammalian chromosomes.

Claire Lemaitre, Eric Tannier, Christian Gautier, Marie-France Sagot

BMC Bioinform., 2008