Daniel Segrè

According to our database, Daniel Segrè authored at least 12 papers between 2003 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2026

Integrative analysis across metagenomic taxonomic classifiers: A case study of the gut microbiome in aging and longevity in the Integrative Longevity Omics Study.

Tanya T. Karagiannis, Ye Chen, Sarah Bald, Albert Tai, Eric R. Reed, Sofiya Milman, Stacy Andersen, Thomas T. Perls, Daniel Segrè, Paola Sebastiani, Meghan I. Short

PLoS Comput. Biol., 2026

2016

Visualization of Metabolic Interaction Networks in Microbial Communities Using VisANT 5.0.

Brian Granger, Yi-Chien Chang, Yan Wang, Charles DeLisi, Daniel Segrè, Zhenjun Hu

PLoS Comput. Biol., 2016

Optimal allocation of metabolic functions among organisms in a microbial ecosystem.

Qi Zhao, Daniel Segrè, Ioannis Ch. Paschalidis

Proceedings of the 55th IEEE Conference on Decision and Control, 2016

2015

Learning cellular objectives from fluxes by inverse optimization.

Qi Zhao, Arion Stettner, Ed Reznik, Daniel Segrè, Ioannis Ch. Paschalidis

Proceedings of the 54th IEEE Conference on Decision and Control, 2015

2013

Flux Imbalance Analysis and the Sensitivity of Cellular Growth to Changes in Metabolite Pools.

Ed Reznik, Pankaj Mehta, Daniel Segrè

PLoS Comput. Biol., 2013

2012

Temporal Expression-based Analysis of Metabolism.

Sara B. Collins, Ed Reznik, Daniel Segrè

PLoS Comput. Biol., 2012

Comparative multi-goal tradeoffs in systems engineering of microbial metabolism.

David Byrne, Alexandra Dumitriu, Daniel Segrè

BMC Syst. Biol., 2012

2011

COMBREX: a project to accelerate the functional annotation of prokaryotic genomes.

Richard J. Roberts, Yi-Chien Chang, Zhenjun Hu, John Rachlin, Brian P. Anton, Revonda M. Pokrzywa, Han-Pil Choi, Lina L. Faller, Jyotsna Guleria, Genevieve Housman, Niels Klitgord, Varun Mazumdar, Mark G. McGettrick, Lais Osmani, Rajeswari Swaminathan, Kevin R. Tao, Stanley Letovsky, Dennis Vitkup, Daniel Segrè, Steven L. Salzberg, Charles DeLisi, Martin Steffen, Simon Kasif

Nucleic Acids Res., 2011

A system-level approach for deciphering the transcriptional response to prion infection.

Mattia Zampieri, Giuseppe Legname, Daniel Segrè, Claudio Altafini

Bioinform., 2011

2010

Signatures of Arithmetic Simplicity in Metabolic Network Architecture.

William J. Riehl, Paul L. Krapivsky, Sidney Redner, Daniel Segrè

PLoS Comput. Biol., 2010

Environments that Induce Synthetic Microbial Ecosystems.

Niels Klitgord, Daniel Segrè

PLoS Comput. Biol., 2010

2003

Mesobiotic Emergence: molecular and Ensemble Complexity in Early Evolution.

Barak Shenhav, Daniel Segrè, Doron Lancet

Adv. Complex Syst., 2003