David Porubsky

According to our database, David Porubsky authored at least 4 papers between 2018 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

SVbyEye: a visual tool to characterize structural variation among whole-genome assemblies.

David Porubsky, Xavi Guitart, Dongahn Yoo, Philip C. Dishuck, William T. Harvey, Evan E. Eichler

Bioinform., 2025

2023

GAVISUNK: genome assembly validation via inter-SUNK distances in Oxford Nanopore reads.

Philip C. Dishuck, Allison N. Rozanski, Glennis Logsdon, David Porubsky, Evan E. Eichler

Bioinform., January, 2023

2020

breakpointR: an R/Bioconductor package to localize strand state changes in Strand-seq data.

David Porubsky, Ashley D. Sanders, Aaron Taudt, Maria Colomé-Tatché, Peter M. Lansdorp, Victor Guryev

Bioinform., 2020

2018

Strand-seq enables reliable separation of long reads by chromosome via expectation maximization.

Maryam Ghareghani, David Porubsky, Ashley D. Sanders, Sascha Meiers, Evan E. Eichler, Jan O. Korbel, Tobias Marschall

Bioinform., 2018