Edward M. Marcotte
Orcid: 0000-0001-8808-180X
According to our database1,
Edward M. Marcotte
authored at least 34 papers
between 2000 and 2023.
Collaborative distances:
Collaborative distances:
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Bibliography
2023
Molecular complex detection in protein interaction networks through reinforcement learning.
BMC Bioinform., December, 2023
Amino acid sequence assignment from single molecule peptide sequencing data using a two-stage classifier.
PLoS Comput. Biol., 2023
Mining Patents with Large Language Models Demonstrates Congruence of Functional Labels and Chemical Structures.
CoRR, 2023
2022
Nucleic Acids Res., 2022
2020
2019
2017
Identifying direct contacts between protein complex subunits from their conditional dependence in proteomics datasets.
PLoS Comput. Biol., 2017
GWAB: a web server for the network-based boosting of human genome-wide association data.
Nucleic Acids Res., 2017
2016
MouseNet v2: a database of gene networks for studying the laboratory mouse and eight other model vertebrates.
Nucleic Acids Res., 2016
Computational discovery of pathway-level genetic vulnerabilities in non-small-cell lung cancer.
Bioinform., 2016
2015
PLoS Comput. Biol., 2015
Controlled Measurement and Comparative Analysis of Cellular Components in <i>E</i>. <i>coli</i> Reveals Broad Regulatory Changes in Response to Glucose Starvation.
PLoS Comput. Biol., 2015
2014
MORPHIN: a web tool for human disease research by projecting model organism biology onto a human integrated gene network.
Nucleic Acids Res., 2014
2013
Prediction of gene-phenotype associations in humans, mice, and plants using phenologs.
BMC Bioinform., 2013
2012
Proceedings of the Quantitative Methods in Proteomics, 2012
2011
Revisiting the negative example sampling problem for predicting protein-protein interactions.
Bioinform., 2011
2009
Integrating shotgun proteomics and mRNA expression data to improve protein identification.
Bioinform., 2009
Mining gene functional networks to improve mass-spectrometry-based protein identification.
Bioinform., 2009
2008
Age-Dependent Evolution of the Yeast Protein Interaction Network Suggests a Limited Role of Gene Duplication and Divergence.
PLoS Comput. Biol., 2008
The APEX Quantitative Proteomics Tool: Generating protein quantitation estimates from LC-MS/MS proteomics results.
BMC Bioinform., 2008
2007
A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality.
BMC Bioinform., 2007
2006
Bioinform., 2006
Integrating Co-occurrence Statistics with Information Extraction for Robust Retrieval of Protein Interactions from Medline.
Proceedings of the Workshop on Linking Natural Language and Biology, 2006
2005
Comparative experiments on learning information extractors for proteins and their interactions.
Artif. Intell. Medicine, 2005
Using Biomedical Literature Mining to Consolidate the Set of Known Human Protein-Protein Interactions.
Proceedings of the ACL-ISMB Workshop on Linking Biological Literature, 2005
2003
Bioinform., 2003
2002
Predicting Protein Function and Nworks on a Genomewide Scale.
Proceedings of the Gene Regulations and Metabolism - Postgenomic Computational Approaches, 2002
2001
Exploiting Big Biology: Integrating Large-scale Biological Data for Function Inference.
Briefings Bioinform., 2001
2000