Hamed Khakzad

According to our database, Hamed Khakzad authored at least 5 papers between 2016 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Multienzyme deep learning models improve peptide de novo sequencing by mass spectrometry proteomics.

Carlos Gueto-Tettay, Di Tang, Lotta Happonen, Moritz Heusel, Hamed Khakzad, Johan Malmström, Lars Malmström

PLoS Comput. Biol., January, 2023

2021

Structural determination of Streptococcus pyogenes M1 protein interactions with human immunoglobulin G using integrative structural biology.

Hamed Khakzad, Lotta Happonen, Yasaman Karami, Sounak Chowdhury, Gizem Ertürk Bergdahl, Michael Nilges, Guy Tran Van Nhieu, Johan Malmström, Lars Malmström

PLoS Comput. Biol., 2021

Cheetah-MS: a web server to model protein complexes using tandem cross-linking mass spectrometry data.

Hamed Khakzad, Lotta Happonen, Johan Malmström, Lars Malmström

Bioinform., 2021

2019

Greedy de novo motif discovery to construct motif repositories for bacterial proteomes.

Hamed Khakzad, Johan Malmström, Lars Malmström

BMC Bioinform., 2019

2016

PDB2Graph: A toolbox for identifying critical amino acids map in proteins based on graph theory.

Niloofar Niknam, Hamed Khakzad, Seyed Shahriar Arab, Hossein Naderi-manesh

Comput. Biol. Medicine, 2016