Johan Malmström

According to our database, Johan Malmström authored at least 9 papers between 2006 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

Deep learning-guided evolutionary optimization for protein design.

Erik Hartman, Di Tang, Johan Malmström

CoRR, March, 2026

Degradation graphs reveal hidden proteolytic activity in peptidomes.

Erik Hartman, Johan Malmström, Jonas Wallin

PLoS Comput. Biol., 2026

2025

Controllable protein design through Feynman-Kac steering.

Erik Hartman, Jonas Wallin, Johan Malmström, Jimmy Olsson

CoRR, November, 2025

2023

Multienzyme deep learning models improve peptide de novo sequencing by mass spectrometry proteomics.

Carlos Gueto-Tettay, Di Tang, Lotta Happonen, Moritz Heusel, Hamed Khakzad, Johan Malmström, Lars Malmström

PLoS Comput. Biol., January, 2023

2021

Structural determination of Streptococcus pyogenes M1 protein interactions with human immunoglobulin G using integrative structural biology.

Hamed Khakzad, Lotta Happonen, Yasaman Karami, Sounak Chowdhury, Gizem Ertürk Bergdahl, Michael Nilges, Guy Tran Van Nhieu, Johan Malmström, Lars Malmström

PLoS Comput. Biol., 2021

Cheetah-MS: a web server to model protein complexes using tandem cross-linking mass spectrometry data.

Hamed Khakzad, Lotta Happonen, Johan Malmström, Lars Malmström

Bioinform., 2021

2019

Greedy de novo motif discovery to construct motif repositories for bacterial proteomes.

Hamed Khakzad, Johan Malmström, Lars Malmström

BMC Bioinform., 2019

2015

DIANA - algorithmic improvements for analysis of data-independent acquisition MS data.

Johan Teleman, Hannes L. Röst, George Rosenberger, Uwe Schmitt, Lars Malmström, Johan Malmström, Fredrik Levander

Bioinform., 2015

2006

2DDB - a bioinformatics solution for analysis of quantitative proteomics data.

Lars Malmström, György Marko-Varga, Gunilla Westergren-Thorsson, Thomas Laurell, Johan Malmström

BMC Bioinform., 2006