Hugo López-Fernández

Orcid: 0000-0002-6476-7206

According to our database1, Hugo López-Fernández authored at least 39 papers between 2011 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Links

Online presence:

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Bibliography

2023
PanDrugs2: prioritizing cancer therapies using integrated individual multi-omics data.
Nucleic Acids Res., July, 2023

On the identification of potential novel therapeutic targets for spinocerebellar ataxia type 1 (SCA1) neurodegenerative disease using EvoPPI3.
J. Integr. Bioinform., July, 2023

Auto-phylo: A Pipeline Maker for Phylogenetic Studies.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2023

2022
SEDA: A Desktop Tool Suite for FASTA Files Processing.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

Real-time polyp detection model using convolutional neural networks.
Neural Comput. Appl., 2022

EvoPPI 2: A Web and Local Platform for the Comparison of Protein-Protein Interaction Data from Multiple Sources from the Same and Distinct Species.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2022

Towards a Flexible and Portable Workflow for Analyzing miRNA-Seq Neuropsychiatric Data: An Initial Replicability Assessment.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2022

2021
Compi: a framework for portable and reproducible pipelines.
PeerJ Comput. Sci., 2021

Deep Neural Networks approaches for detecting and classifying colorectal polyps.
Neurocomputing, 2021

Application of miRNA-seq in neuropsychiatry: A methodological perspective.
Comput. Biol. Medicine, 2021

DREIMT: a drug repositioning database and prioritization tool for immunomodulation.
Bioinform., 2021

On the Reproducibility of MiRNA-Seq Differential Expression Analyses in Neuropsychiatric Diseases.
Proceedings of the Practical Applications of Computational Biology & Bioinformatics, 2021

The pegi3s Bioinformatics Docker Images Project.
Proceedings of the Practical Applications of Computational Biology & Bioinformatics, 2021

2020
Compi Hub: A Public Repository for Sharing and Discovering Compi Pipelines.
Proceedings of the Practical Applications of Computational Biology & Bioinformatics, 2020

Inferences on Mycobacterium Leprae Host Immune Response Escape and Antibiotic Resistance Using Genomic Data and GenomeFastScreen.
Proceedings of the Practical Applications of Computational Biology & Bioinformatics, 2020

2019
DEWE: A novel tool for executing differential expression RNA-Seq workflows in biomedical research.
Comput. Biol. Medicine, 2019

Inferring Positive Selection in Large Viral Datasets.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2019

Proposal of a New Bioinformatics Pipeline for Metataxonomics in Precision Medicine.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2019

Deep Learning Techniques for Real Time Computer-Aided Diagnosis in Colorectal Cancer.
Proceedings of the Distributed Computing and Artificial Intelligence, 2019

2018
Perceptions of the use of intelligent information access systems in university level active learning activities among teachers of biomedical subjects.
Int. J. Medical Informatics, 2018

S2P: A software tool to quickly carry out reproducible biomedical research projects involving 2D-gel and MALDI-TOF MS protein data.
Comput. Methods Programs Biomed., 2018

Bicycle: a bioinformatics pipeline to analyze bisulfite sequencing data.
Bioinform., 2018

EvoPPI: A Web Application to Compare Protein-Protein Interactions (PPIs) from Different Databases and Species.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2018

A Bioinformatics Protocol for Quickly Creating Large-Scale Phylogenetic Trees.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2018

2017
RUbioSeq+: A multiplatform application that executes parallelized pipelines to analyse next-generation sequencing data.
Comput. Methods Programs Biomed., 2017

Automated Collection and Sharing of Adaptive Amino Acid Changes Data.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

S2P: A Desktop Application for Fast and Easy Processing of 2D-Gel and MALDI-Based Mass Spectrometry Protein Data.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

2016
LA-iMageS: a software for elemental distribution bioimaging using LA-ICP-MS data.
J. Cheminformatics, 2016

RUbioSeq+: An Application that Executes Parallelized Pipelines to Analyse Next-Generation Sequencing Data.
Proceedings of the 10th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2016

2015
Mass-Up: an all-in-one open software application for MALDI-TOF mass spectrometry knowledge discovery.
BMC Bioinform., 2015

2014
A comprehensive analysis about the influence of low-level preprocessing techniques on mass spectrometry data for sample classification.
Int. J. Data Min. Bioinform., 2014

Web scraping technologies in an API world.
Briefings Bioinform., 2014

2013
genEnsemble: A new model for the combination of classifiers and integration of biological knowledge applied to genomic data.
Expert Syst. Appl., 2013

BioAnnote: A software platform for annotating biomedical documents with application in medical learning environments.
Comput. Methods Programs Biomed., 2013

A Workflow for the Application of Biclustering to Mass Spectrometry Data.
Proceedings of the 7th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2013

2012
A JAVA application framework for scientific software development.
Softw. Pract. Exp., 2012

Applying AIBench Framework to Develop Rich User Interfaces in NGS Studies.
Proceedings of the 6th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2012

2011
PileLineGUI: a desktop environment for handling genome position files in next-generation sequencing studies.
Nucleic Acids Res., 2011

Rapid development of proteomic applications with the AIBench framework.
J. Integr. Bioinform., 2011


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