Daniel Glez-Peña

Orcid: 0000-0002-6129-7245

According to our database1, Daniel Glez-Peña authored at least 80 papers between 2006 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Bibliography

2023
PanDrugs2: prioritizing cancer therapies using integrated individual multi-omics data.
Nucleic Acids Res., July, 2023

2022
Real-time polyp detection model using convolutional neural networks.
Neural Comput. Appl., 2022

2021
Compi: a framework for portable and reproducible pipelines.
PeerJ Comput. Sci., 2021

Deep Neural Networks approaches for detecting and classifying colorectal polyps.
Neurocomputing, 2021

DREIMT: a drug repositioning database and prioritization tool for immunomodulation.
Bioinform., 2021

2020
Compi Hub: A Public Repository for Sharing and Discovering Compi Pipelines.
Proceedings of the Practical Applications of Computational Biology & Bioinformatics, 2020

2019
Proposal of a New Bioinformatics Pipeline for Metataxonomics in Precision Medicine.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2019

Deep Learning Techniques for Real Time Computer-Aided Diagnosis in Colorectal Cancer.
Proceedings of the Distributed Computing and Artificial Intelligence, 2019

2018
Perceptions of the use of intelligent information access systems in university level active learning activities among teachers of biomedical subjects.
Int. J. Medical Informatics, 2018

S2P: A software tool to quickly carry out reproducible biomedical research projects involving 2D-gel and MALDI-TOF MS protein data.
Comput. Methods Programs Biomed., 2018

Bicycle: a bioinformatics pipeline to analyze bisulfite sequencing data.
Bioinform., 2018

2017
RUbioSeq+: A multiplatform application that executes parallelized pipelines to analyse next-generation sequencing data.
Comput. Methods Programs Biomed., 2017

S2P: A Desktop Application for Fast and Easy Processing of 2D-Gel and MALDI-Based Mass Spectrometry Protein Data.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

2016
LA-iMageS: a software for elemental distribution bioimaging using LA-ICP-MS data.
J. Cheminformatics, 2016

A case-based reasoning system for aiding detection and classification of nosocomial infections.
Decis. Support Syst., 2016

RUbioSeq+: An Application that Executes Parallelized Pipelines to Analyse Next-Generation Sequencing Data.
Proceedings of the 10th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2016

2015
Enabling systematic, harmonised and large-scale biofilms data computation: The Biofilms Experiment Workbench.
Comput. Methods Programs Biomed., 2015

Marky: A tool supporting annotation consistency in multi-user and iterative document annotation projects.
Comput. Methods Programs Biomed., 2015

Mass-Up: an all-in-one open software application for MALDI-TOF mass spectrometry knowledge discovery.
BMC Bioinform., 2015

miRGate: a curated database of human, mouse and rat miRNA-mRNA targets.
Database J. Biol. Databases Curation, 2015

A New Bioinformatic Pipeline to Address the Most Common Requirements in RNA-seq Data Analysis.
Proceedings of the 9th International Conference on Practical Applications of Computational Biology and Bioinformatics, 2015

The Application of Available Technologies for the Utilization and Commercialization of Resources and Benefits Obtained from Solar Energy.
Proceedings of the Conference on ENTERprise Information Systems/International Conference on Project MANagement/Conference on Health and Social Care Information Systems and Technologies, 2015

2014
A comprehensive analysis about the influence of low-level preprocessing techniques on mass spectrometry data for sample classification.
Int. J. Data Min. Bioinform., 2014

Web scraping technologies in an API world.
Briefings Bioinform., 2014

A novel ensemble of classifiers that use biological relevant gene sets for microarray classification.
Appl. Soft Comput., 2014

BEW: Bioinformatics Workbench for Analysis of Biofilms Experimental Data.
Proceedings of the 8th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2014

Marky: A Lightweight Web Tracking Tool for Document Annotation.
Proceedings of the 8th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2014

2013
genEnsemble: A new model for the combination of classifiers and integration of biological knowledge applied to genomic data.
Expert Syst. Appl., 2013

BioAnnote: A software platform for annotating biomedical documents with application in medical learning environments.
Comput. Methods Programs Biomed., 2013

A Workflow for the Application of Biclustering to Mass Spectrometry Data.
Proceedings of the 7th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2013

2012
A JAVA application framework for scientific software development.
Softw. Pract. Exp., 2012

Using Variable Precision Rough Set for Selection and Classification of Biological Knowledge Integrated in DNA Gene Expression.
J. Integr. Bioinform., 2012

A novel ensemble approach for multicategory classification of DNA microarray data using biological relevant gene sets.
Int. J. Data Min. Bioinform., 2012

Applying AIBench Framework to Develop Rich User Interfaces in NGS Studies.
Proceedings of the 6th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2012

Biological Knowledge Integration in DNA Microarray Gene Expression Classification Based on Rough Set Theory.
Proceedings of the 6th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2012

2011
PileLineGUI: a desktop environment for handling genome position files in next-generation sequencing studies.
Nucleic Acids Res., 2011

Rapid development of proteomic applications with the AIBench framework.
J. Integr. Bioinform., 2011

Using inductive learning to assess compound feed production in cooperative poultry farms.
Expert Syst. Appl., 2011

PileLine: a toolbox to handle genome position information in next-generation sequencing studies.
BMC Bioinform., 2011

Medical-Miner at TREC 2011 Medical Records Track.
Proceedings of The Twentieth Text REtrieval Conference, 2011

Building Proteomics Applications with the AIBench Application Framework.
Proceedings of the 5th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2011

An Intuitive Workflow to Retrieve Somatic Mutations in Next Generation Sequencing Studies.
Proceedings of the 5th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2011

Building a GATK-Based Tool for Methylation Analysis in Next-Generation Bisulfite Sequencing Experiments.
Proceedings of the 5th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2011

2010
Medical-Miner: Integración de conocimiento textual explícito en técnicas de minería de datos para la creación de herramientas traslacionales en medicina.
Proces. del Leng. Natural, 2010

ALTER: program-oriented conversion of DNA and protein alignments.
Nucleic Acids Res., 2010

PathJam: a new service for integrating biological pathway information.
J. Integr. Bioinform., 2010

BioDR: Semantic indexing networks for biomedical document retrieval.
Expert Syst. Appl., 2010

AIBench: A rapid application development framework for translational research in biomedicine.
Comput. Methods Programs Biomed., 2010

Resumen de Tesis: Model for explicit biological knowledge integration in DNA microarray gene expression classification.
Inteligencia Artif., 2010

Multi-agent System for Mass Spectrometry Analysis.
Proceedings of the Trends in Practical Applications of Agents and Multiagent Systems, 2010

PathAgent: Multi-agent System for Updated Pathway Information Integration.
Proceedings of the Trends in Practical Applications of Agents and Multiagent Systems, 2010

A Comparative Study of Microarray Data Classification Methods Based on Ensemble Biological Relevant Gene Sets.
Proceedings of the Advances in Bioinformatics, 2010

An Experimental Evaluation of a Novel Stochastic Method for Iterative Class Discovery on Real Microarray Datasets.
Proceedings of the Advances in Bioinformatics, 2010

Incorporating biological knowledge to microarray data classification through genomic data fusion.
Proceedings of the 13th Conference on Information Fusion, 2010

2009
Fuzzy Patterns and GCS Networks to Clustering Gene Expression Data.
Proceedings of the Fuzzy Systems in Bioinformatics and Computational Biology, 2009

WhichGenes: a web-based tool for gathering, building, storing and exporting gene sets with application in gene set enrichment analysis.
Nucleic Acids Res., 2009

@Note: A workbench for Biomedical Text Mining.
J. Biomed. Informatics, 2009

Managing irrelevant knowledge in CBR models for unsolicited e-mail classification.
Expert Syst. Appl., 2009

geneCBR: a translational tool for multiple-microarray analysis and integrative information retrieval for aiding diagnosis in cancer research.
BMC Bioinform., 2009

DFP: a Bioconductor package for fuzzy profile identification and gene reduction of microarray data.
BMC Bioinform., 2009

A Multi-Agent System Approach for Algorithm Parameter Tuning.
Proceedings of the 7th International Conference on Practical Applications of Agents and Multi-Agent Systems, 2009

geneSetFinder: A Multiagent Architecture for Gathering Biological Information.
Proceedings of the 7th International Conference on Practical Applications of Agents and Multi-Agent Systems, 2009

Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing.
Proceedings of the Distributed Computing, 2009

Classification of MedLine Documents Using MeSH Terms.
Proceedings of the Distributed Computing, 2009

An Evolutionary Approach for Sample-Based Clustering on Microarray Data.
Proceedings of the Distributed Computing, 2009

Current Efforts to Integrate Biological Pathway Information.
Proceedings of the Distributed Computing, 2009

Applying Text Mining to Search for Protein Patterns.
Proceedings of the Distributed Computing, 2009

2008
Multiple-Microarray Analysis and Internet Gathering Information with Application for Aiding Medical Diagnosis in Cancer Research.
Proceedings of the 2nd International Workshop on Practical Applications of Computational Biology and Bioinformatics, 2008

Beds and Bits: The Challenge of Translational Bioinformatics.
Proceedings of the 2nd International Workshop on Practical Applications of Computational Biology and Bioinformatics, 2008

A Comparative Impact Study of Attribute Selection Techniques on Naïve Bayes Spam Filters.
Proceedings of the Advances in Data Mining. Medical Applications, 2008

The Impact of Noise in Spam Filtering: A Case Study.
Proceedings of the Advances in Data Mining. Medical Applications, 2008

Integrating Heterogeneous Data and Applications with Distributed-AIBENCH.
Proceedings of the 8th International Conference on Hybrid Intelligent Systems (HIS 2008), 2008

A framework for the development of Biomedical Text Mining software tools.
Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

2007
Developing New Services for the Automotive Industry using Matrix.
Proceedings of the WEBIST 2007, 2007

Analyzing the Performance of Spam Filtering Methods When Dimensionality of Input Vector Changes.
Proceedings of the Machine Learning and Data Mining in Pattern Recognition, 2007

Assessing Classification Accuracy in the Revision Stage of a CBR Spam Filtering System.
Proceedings of the Case-Based Reasoning Research and Development, 2007

A platform for the selection of genes in DNA microarraydata using evolutionary algorithms.
Proceedings of the Genetic and Evolutionary Computation Conference, 2007

Relaxing Feature Selection in Spam Filtering by Using Case-Based Reasoning Systems.
Proceedings of the Progress in Artificial Intelligence, 2007

2006
Applying GCS Networks to Fuzzy Discretized Microarray Data for Tumour Diagnosis.
Proceedings of the Intelligent Data Engineering and Automated Learning, 2006

Using Fuzzy Patterns for Gene Selection and Data Reduction on Microarray Data.
Proceedings of the Intelligent Data Engineering and Automated Learning, 2006


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