Jan Klein

Orcid: 0000-0001-9421-3549

Affiliations:
  • Fraunhofer MEVIS, Institute for Medical Image Computing, Bremen, Germany


According to our database1, Jan Klein authored at least 62 papers between 2003 and 2023.

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Timeline

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Bibliography

2023
MR-CT multi-atlas registration guided by fully automated brain structure segmentation with CNNs.
Int. J. Comput. Assist. Radiol. Surg., March, 2023

Unsupervised learning of healthy anatomy for anomaly detection in brain CT scans.
Proceedings of the Medical Imaging 2023: Computer-Aided Diagnosis, 2023

2022
Deep learning-assisted fully automatic fiber tracking for tremor treatment.
Proceedings of the Medical Imaging 2022: Image-Guided Procedures, 2022

Fully automated longitudinal tracking and in-depth analysis of the entire tumor burden: unlocking the complexity.
Proceedings of the Medical Imaging 2022: Computer-Aided Diagnosis, 2022

Iterative Method to Register Longitudinal MRI Acquisitions in Neurosurgical Context.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2022

A Python SDK for Authoring and using Computer-interpretable Guidelines.
Proceedings of the 15th International Joint Conference on Biomedical Engineering Systems and Technologies, 2022

2021
Comparison of different automatic solutions for resection cavity segmentation in postoperative MRI volumes including longitudinal acquisitions.
Proceedings of the Medical Imaging 2021: Image-Guided Procedures, 2021

A system for fully automated monitoring of lesion evolution over time in multiple sclerosis.
Proceedings of the Medical Imaging 2021: Computer-Aided Diagnosis, 2021

2020
Enhanced registration of ultrasound volumes by segmentation of resection cavity in neurosurgical procedures.
Int. J. Comput. Assist. Radiol. Surg., 2020

Learning a Loss Function for Segmentation: A Feasibility Study.
Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

2019
Segmentation-based registration of ultrasound volumes for glioma resection in image-guided neurosurgery.
Int. J. Comput. Assist. Radiol. Surg., 2019

Quantitative and qualitative methods for efficient evaluation of multiple 3D organ segmentations.
Proceedings of the Medical Imaging 2019: Image Processing, 2019

Neural-network-based automatic segmentation of cerebral ultrasound images for improving image-guided neurosurgery.
Proceedings of the Medical Imaging 2019: Image-Guided Procedures, 2019

Data Pooling and Sampling of Heterogeneous Image Data for White Matter Hyperintensity Segmentation.
Proceedings of the OR 2.0 Context-Aware Operating Theaters and Machine Learning in Clinical Neuroimaging, 2019

Registration of Ultrasound Volumes Based on Euclidean Distance Transform.
Proceedings of the Large-Scale Annotation of Biomedical Data and Expert Label Synthesis and Hardware Aware Learning for Medical Imaging and Computer Assisted Intervention, 2019

Artifact-driven sampling schemes for robust female pelvis CBCT segmentation using deep learning.
Proceedings of the Medical Imaging 2019: Computer-Aided Diagnosis, 2019

2018
Exploring DeepMedic for the purpose of segmenting white matter hyperintensity lesions.
Proceedings of the Medical Imaging 2018: Computer-Aided Diagnosis, 2018

Comparison of different deep learning approaches for parotid gland segmentation from CT images.
Proceedings of the Medical Imaging 2018: Computer-Aided Diagnosis, 2018

2015
Measuring the lesion load of multiple sclerosis patients within the corticospinal tract.
Proceedings of the Medical Imaging 2015: Image Processing, 2015

Automatic segmentation of perifalcine structures in two-dimensional ultrasound images using object-based image analysis.
Proceedings of the 14. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie, 2015

Automatic Segmentation of the Cerebral Falx and Adjacent Gyri in 2D Ultrasound Images.
Proceedings of the Bildverarbeitung für die Medizin 2015, Algorithmen - Systeme, 2015

2013
A Ray-based Approach for Boundary Estimation of Fiber Bundles Derived from Diffusion Tensor Imaging.
CoRR, 2013

Mobile augmented reality for computer-assisted percutaneous nephrolithotomy.
Int. J. Comput. Assist. Radiol. Surg., 2013

Interactive Visualization of Neuroanatomical Data for a Hands-On Multimedia Exhibit.
Proceedings of the 3rd International Workshop on Visualization in Medicine and Life Sciences, 2013

2012
DTI segmentation via the combined analysis of connectivity maps and tensor distances.
NeuroImage, 2012

Atlas-based fiber reconstruction from diffusion tensor MRI data.
Int. J. Comput. Assist. Radiol. Surg., 2012

Efficient global fiber tracking on multi-dimensional diffusion direction maps.
Proceedings of the Medical Imaging 2012: Image Processing, 2012

2011
Segmentation of fiber tracts based on an accuracy analysis on diffusion tensor software phantoms.
NeuroImage, 2011

Benchmarking the Quality of Diffusion-Weighted Images
CoRR, 2011

Ray-Based and Graph-Based Methods for Fiber Bundle Boundary Estimation
CoRR, 2011

A Semi-Automatic Graph-Based Approach for Determining the Boundary of Eloquent Fiber Bundles in the Human Brain
CoRR, 2011

Boundary estimation of fiber bundles derived from diffusion tensor images.
Int. J. Comput. Assist. Radiol. Surg., 2011

Towards interactive exploration of DTI data.
Proceedings of the 10. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie, 2011

2010
Assessing fiber tracking accuracy via diffusion tensor software models.
Proceedings of the Medical Imaging 2010: Image Processing, 2010

Qualitative and quantitative analysis of probabilistic and deterministic fiber tracking.
Proceedings of the Medical Imaging 2010: Image Processing, 2010

Real-time fiber selection using the Wii remote.
Proceedings of the Medical Imaging 2010: Visualization, 2010

A Fast and Robust Graph-Based Approach for Boundary Estimation of Fiber Bundles Relying on Fractional Anisotropy Maps.
Proceedings of the 20th International Conference on Pattern Recognition, 2010

Segmentierung von Faserbahnsystemen mit einem strahlenbasierten Ansatz und Glättung der FA- und Winkel-Karten.
Proceedings of the 9. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie, 2010

2009
Visual computing for medical diagnosis and treatment.
Comput. Graph., 2009

A GPU-based fiber tracking framework using geometry shaders.
Proceedings of the Medical Imaging 2009: Visualization, 2009

Objective tumour heterogeneity determination in gliomas.
Proceedings of the Medical Imaging 2009: Computer-Aided Diagnosis, 2009

NeuroQLab - A Software Assistant for Neurosurgical Planning and Quantitative Image Analysis.
Proceedings of the 39. Jahrestagung der Gesellschaft für Informatik, Im Focus das Leben, INFORMATIK 2009, Lübeck, Germany, September 28, 2009

Softwareassistenten in der Medizin 2009 - Computerunterstützung für die medizinische Diagnostik und Therapieplanung.
Proceedings of the 39. Jahrestagung der Gesellschaft für Informatik, Im Focus das Leben, INFORMATIK 2009, Lübeck, Germany, September 28, 2009

2008
Towards user-independent DTI quantification.
Proceedings of the Medical Imaging 2008: Image Processing, 2008

Efficient fiber clustering using parameterized polynomials.
Proceedings of the Medical Imaging 2008: Visualization, 2008

Advanced Algorithms in Medical Computer Graphics.
Proceedings of the 29th Annual Conference of the European Association for Computer Graphics, 2008

2007
Grid-based spectral fiber clustering.
Proceedings of the Medical Imaging 2007: Visualization and Image-Guided Procedures, 2007

Multispectral brain tumor segmentation based on histogram model adaptation.
Proceedings of the Medical Imaging 2007: Computer-Aided Diagnosis, 2007

State-of-the-Art Computer Graphics in Neurosurgical Planning and Risk Assessment.
Proceedings of the 28th Annual Conference of the European Association for Computer Graphics, 2007

Automatic Quantification of DTI Parameters Along Fiber Bundles.
Proceedings of the Bildverarbeitung für die Medizin 2007, 2007

2006
Brain structure visualization using spectral fiber clustering.
Proceedings of the International Conference on Computer Graphics and Interactive Techniques, 2006

A Model for the Expected Running Time of Collision Detection using AABB Trees.
Proceedings of the 12th Eurographics Symposium on Virtual Environments, 2006

2005
Efficient collision detection for point and polygon based models.
PhD thesis, 2005

Interpolation Search for Point Cloud Intersection.
Proceedings of the 13-th International Conference in Central Europe on Computer Graphics, 2005

The expected running time of hierarchical collision detection.
Proceedings of the International Conference on Computer Graphics and Interactive Techniques, 2005

2004
The Randomized Sample Tree: A Data Structure for Interactive Walkthroughs in Externally Stored Virtual Environments.
Presence Teleoperators Virtual Environ., 2004

Point Cloud Collision Detection.
Comput. Graph. Forum, 2004

Point cloud surfaces using geometric proximity graphs.
Comput. Graph., 2004

Proximity Graphs for Defining Surfaces over Point Clouds.
Proceedings of the 1st Symposium on Point Based Graphics, 2004

Nice and fast implicit surfaces over noisy point clouds.
Proceedings of the International Conference on Computer Graphics and Interactive Techniques, 2004

2003
Time-critical collision detection using an average-case approach.
Proceedings of the ACM Symposium on Virtual Reality Software and Technology, 2003

ADB-Trees: Controlling the Error of Time-Critical Collision Detection.
Proceedings of the 8th International Fall Workshop on Vision, Modeling, and Visualization, 2003


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