Jan Voges

According to our database, Jan Voges authored at least 17 papers between 2016 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2025

Interpretable Causal Representation Learning for Biological Data in the Pathway Space.

Jesus de la Fuente Cedeño, Robert Lehmann, Carlos Ruiz-Arenas, Jan Voges, Irene Marín-Goñi, Xabier Martinez de Morentin, David Gomez-Cabrero, Idoia Ochoa, Jesper Tegnér, Vincenzo Lagani, Mikel Hernaez

Proceedings of the Thirteenth International Conference on Learning Representations, 2025

2024

HiCMC: High-Efficiency Contact Matrix Compressor.

Yeremia Gunawan Adhisantoso, Tim Körner, Fabian Müntefering, Jörn Ostermann, Jan Voges

BMC Bioinform., December, 2024

Genie: The First Open-Source ISO/IEC Encoder for Genomic Data.

Fabian Müntefering, Yeremia Gunawan Adhisantoso, Shubham Chandak, Jörn Ostermann, Mikel Hernaez, Jan Voges

Dataset, April, 2024

Cooperative Design of a Dashboard for Monitoring the P4D Cohort Study on Major Depression.

Hamidreza Maharlou, Nicole Bössel-Debbert, Michael Lucht, Hannah B. Maier, Stefanie Mücke, Fabian Müntefering, Barbara Neuhaus, Jana Prokein, Christine Reif-Leonhard, Jan Voges, Heike Weber, Antoine Weihs, Helge Frieling, Steffen Oeltze-Jafra

Proceedings of the 26th Eurographics Conference on Visualization, 2024

2023

GVC: efficient random access compression for gene sequence variations.

Yeremia Gunawan Adhisantoso, Jan Voges, Christian Rohlfing, Viktor Tunev, Jens-Rainer Ohm, Jörn Ostermann

BMC Bioinform., December, 2023

Python Wrapper for Context-based Adaptive Binary Arithmetic Coding.

Christian Rohlfing, Thibaut Meyer, Jens Schneider, Jan Voges

Proceedings of the IEEE International Conference on Visual Communications and Image Processing, 2023

2022

Compression of DNA sequencing data

Jan Voges

PhD thesis, 2022

2021

An Introduction to MPEG-G: The First Open ISO/IEC Standard for the Compression and Exchange of Genomic Sequencing Data.

Jan Voges, Mikel Hernaez, Marco Mattavelli, Jörn Ostermann

Proc. IEEE, 2021

2020

GABAC: an arithmetic coding solution for genomic data.

Jan Voges, Tom Paridaens, Fabian Müntefering, Liudmila S. Mainzer, Brian Bliss, Mingyu Yang, Idoia Ochoa, Jan Fostier, Jörn Ostermann, Mikel Hernaez

Bioinform., 2020

2019

AliCo: A New Efficient Representation for SAM Files.

Idoia Ochoa, Hongyi Li, Florian Baumgarte, Charles Hergenrother, Jan Voges, Mikel Hernaez

Proceedings of the Data Compression Conference, 2019

2018

A Two-Level Scheme for Quality Score Compression.

Jan Voges, Ali Fotouhi, Jörn Ostermann, Muhammed Oguzhan Külekci

J. Comput. Biol., 2018

CALQ: compression of quality values of aligned sequencing data.

Jan Voges, Jörn Ostermann, Mikel Hernaez

Bioinform., 2018

A Comparison of JEM and AV1 with HEVC: Coding Tools, Coding Efficiency and Complexity.

Thorsten Laude, Yeremia Gunawan Adhisantoso, Jan Voges, Marco Munderloh, Jörn Ostermann

Proceedings of the 2018 Picture Coding Symposium, 2018

Lossy Compression of Quality Scores in Differential Gene Expression: A First Assessment and Impact Analysis.

Ana A. Hernandez-Lopez, Jan Voges, Claudio Alberti, Marco Mattavelli, Jörn Ostermann

Proceedings of the 2018 Data Compression Conference, 2018

2017

Differential Gene Expression with Lossy Compression of Quality Scores in RNA-Seq Data.

Ana A. Hernandez-Lopez, Jan Voges, Claudio Alberti, Marco Mattavelli, Jörn Ostermann

Proceedings of the 2017 Data Compression Conference, 2017

2016

Predictive Coding of Aligned Next-Generation Sequencing Data.

Jan Voges, Marco Munderloh, Jörn Ostermann

Proceedings of the 2016 Data Compression Conference, 2016

An Evaluation Framework for Lossy Compression of Genome Sequencing Quality Values.

Claudio Alberti, Noah M. Daniels, Mikel Hernaez, Jan Voges, Rachel L. Goldfeder, Ana A. Hernandez-Lopez, Marco Mattavelli, Bonnie Berger

Proceedings of the 2016 Data Compression Conference, 2016