Jannis Born

Orcid: 0000-0001-8307-5670

According to our database1, Jannis Born authored at least 27 papers between 2018 and 2024.

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Bibliography

2024
Quantum Theory and Application of Contextual Optimal Transport.
CoRR, 2024

2023
Regression Transformer enables concurrent sequence regression and generation for molecular language modelling.
Nat. Mac. Intell., April, 2023

Language models in molecular discovery.
CoRR, 2023

Domain-agnostic and Multi-level Evaluation of Generative Models.
CoRR, 2023

Unifying Molecular and Textual Representations via Multi-task Language Modelling.
Proceedings of the International Conference on Machine Learning, 2023

2022
Accelerating Molecular Discovery with Generative Language Models: A journey through the chemical space.
PhD thesis, 2022

On the Choice of Active Site Sequences for Kinase-Ligand Affinity Prediction.
J. Chem. Inf. Model., 2022

Active Site Sequence Representations of Human Kinases Outperform Full Sequence Representations for Affinity Prediction and Inhibitor Generation: 3D Effects in a 1D Model.
J. Chem. Inf. Model., 2022

GT4SD: Generative Toolkit for Scientific Discovery.
CoRR, 2022

Regression Transformer: Concurrent Conditional Generation and Regression by Blending Numerical and Textual Tokens.
CoRR, 2022

A computational investigation of inventive spelling and the "Lesen durch Schreiben" method.
Comput. Educ. Artif. Intell., 2022

A Fully Differentiable Set Autoencoder.
Proceedings of the KDD '22: The 28th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, Washington, DC, USA, August 14, 2022

2021
On the role of artificial intelligence in medical imaging of COVID-19.
Patterns, 2021

Data-driven molecular design for discovery and synthesis of novel ligands: a case study on SARS-CoV-2.
Mach. Learn. Sci. Technol., 2021

TITAN: T-cell receptor specificity prediction with bimodal attention networks.
Bioinform., 2021

Lessons Learned from the Development and Application of Medical Imaging-Based AI Technologies for Combating COVID-19: Why Discuss, What Next.
Proceedings of the Clinical Image-Based Procedures, Distributed and Collaborative Learning, Artificial Intelligence for Combating COVID-19 and Secure and Privacy-Preserving Machine Learning, 2021

2020
PaccMann: a web service for interpretable anticancer compound sensitivity prediction.
Nucleic Acids Res., 2020

Accelerating COVID-19 Differential Diagnosis with Explainable Ultrasound Image Analysis.
CoRR, 2020

PaccMann<sup>RL</sup> on SARS-CoV-2: Designing antiviral candidates with conditional generative models.
CoRR, 2020

POCOVID-Net: Automatic Detection of COVID-19 From a New Lung Ultrasound Imaging Dataset (POCUS).
CoRR, 2020

COVID-19 Control by Computer Vision Approaches: A Survey.
IEEE Access, 2020

PaccMann<sup>RL</sup>: Designing Anticancer Drugs From Transcriptomic Data via Reinforcement Learning.
Proceedings of the Research in Computational Molecular Biology, 2020

CogMol: Target-Specific and Selective Drug Design for COVID-19 Using Deep Generative Models.
Proceedings of the Advances in Neural Information Processing Systems 33: Annual Conference on Neural Information Processing Systems 2020, 2020

2019
AI Enables Explainable Drug Sensitivity Screenings.
ERCIM News, 2019

Reinforcement learning-driven de-novo design of anticancer compounds conditioned on biomolecular profiles.
CoRR, 2019

Towards Explainable Anticancer Compound Sensitivity Prediction via Multimodal Attention-based Convolutional Encoders.
CoRR, 2019

2018
PaccMann: Prediction of anticancer compound sensitivity with multi-modal attention-based neural networks.
CoRR, 2018


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