Jie Zhang

Orcid: 0000-0001-6939-7905

Affiliations:
  • Indiana University, Indianapolis, IN, USA
  • Ohio State University, Department of Biomedical Information, Columbus, OH, USA (former)


According to our database1, Jie Zhang authored at least 22 papers between 2009 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book  In proceedings  Article  PhD thesis  Dataset  Other 

Links

Online presence:

On csauthors.net:

Bibliography

2024
Text mining and portal development for gene-specific publications on Alzheimer's disease and other neurodegenerative diseases.
BMC Medical Informatics Decis. Mak., December, 2024

RSAM-Seg: A SAM-based Approach with Prior Knowledge Integration for Remote Sensing Image Semantic Segmentation.
CoRR, 2024

2022
SPCS: a spatial and pattern combined smoothing method for spatial transcriptomic expression.
Briefings Bioinform., 2022

2021
Weakly Supervised Deep Ordinal Cox Model for Survival Prediction From Whole-Slide Pathological Images.
IEEE Trans. Medical Imaging, 2021

<i>BrcaSeg</i>: A Deep Learning Approach for Tissue Quantification and Genomic Correlations of Histopathological Images.
Genom. Proteom. Bioinform., 2021

TSUNAMI: Translational Bioinformatics Tool Suite for Network Analysis and Mining.
Genom. Proteom. Bioinform., 2021

TPSC: a module detection method based on topology potential and spectral clustering in weighted networks and its application in gene co-expression module discovery.
BMC Bioinform., 2021

Transfer Learning via Optimal Transportation for Integrative Cancer Patient Stratification.
Proceedings of the Thirtieth International Joint Conference on Artificial Intelligence, 2021

2020
Integrative Analysis of Pathological Images and Multi-Dimensional Genomic Data for Early-Stage Cancer Prognosis.
IEEE Trans. Medical Imaging, 2020

Multi-task multi-modal learning for joint diagnosis and prognosis of human cancers.
Medical Image Anal., 2020

Low-Rank Reorganization via Proportional Hazards Non-negative Matrix Factorization Unveils Survival Associated Gene Clusters.
CoRR, 2020

2019
Generalized gene co-expression analysis via subspace clustering using low-rank representation.
BMC Bioinform., 2019

LAmbDA: label ambiguous domain adaptation dataset integration reduces batch effects and improves subtype detection.
Bioinform., 2019

Topological Methods for Visualization and Analysis of High Dimensional Single-Cell RNA Sequencing Data.
Proceedings of the Biocomputing 2019: Proceedings of the Pacific Symposium, 2019

2018
Genetic Mutations Associated with Histopathology Changes in Kidney Cancer.
Proceedings of the AMIA 2018, 2018

2013
Gene co-expression analysis predicts genetic aberration loci associated with colon cancer metastasis.
Int. J. Comput. Biol. Drug Des., 2013

2012
Weighted Frequent Gene Co-expression Network Mining to Identify Genes Involved in Genome Stability.
PLoS Comput. Biol., 2012

2011
Predicting Parkinson's disease related genes using frequent gene co-expression analysis.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

Identifying smoking associated gene co-expression networks related to oral cancer initiation.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

2010
Using gene co-expression network analysis to predict biomarkers for chronic lymphocytic leukemia.
BMC Bioinform., 2010

Multi-dimensional discovery of biomarker and phenotype complexes.
BMC Bioinform., 2010

2009
Using Frequent Co-expression Network to Identify Gene Clusters for Breast Cancer Prognosis.
Proceedings of the International Joint Conferences on Bioinformatics, 2009


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