Jie Zhang

Orcid: 0000-0001-6939-7905

Affiliations:
  • Indiana University, Indianapolis, IN, USA
  • Ohio State University, Department of Biomedical Information, Columbus, OH, USA (former)


According to our database1, Jie Zhang authored at least 21 papers between 2009 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
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Links

Online presence:

On csauthors.net:

Bibliography

2024
Text mining and portal development for gene-specific publications on Alzheimer's disease and other neurodegenerative diseases.
BMC Medical Informatics Decis. Mak., December, 2024

RSAM-Seg: A SAM-based Approach with Prior Knowledge Integration for Remote Sensing Image Semantic Segmentation.
CoRR, 2024

2022
SPCS: a spatial and pattern combined smoothing method for spatial transcriptomic expression.
Briefings Bioinform., 2022

2021
Weakly Supervised Deep Ordinal Cox Model for Survival Prediction From Whole-Slide Pathological Images.
IEEE Trans. Medical Imaging, 2021

<i>BrcaSeg</i>: A Deep Learning Approach for Tissue Quantification and Genomic Correlations of Histopathological Images.
Genom. Proteom. Bioinform., 2021

TSUNAMI: Translational Bioinformatics Tool Suite for Network Analysis and Mining.
Genom. Proteom. Bioinform., 2021

TPSC: a module detection method based on topology potential and spectral clustering in weighted networks and its application in gene co-expression module discovery.
BMC Bioinform., 2021

2020
Integrative Analysis of Pathological Images and Multi-Dimensional Genomic Data for Early-Stage Cancer Prognosis.
IEEE Trans. Medical Imaging, 2020

Multi-task multi-modal learning for joint diagnosis and prognosis of human cancers.
Medical Image Anal., 2020

Low-Rank Reorganization via Proportional Hazards Non-negative Matrix Factorization Unveils Survival Associated Gene Clusters.
CoRR, 2020

2019
Generalized gene co-expression analysis via subspace clustering using low-rank representation.
BMC Bioinform., 2019

LAmbDA: label ambiguous domain adaptation dataset integration reduces batch effects and improves subtype detection.
Bioinform., 2019

Topological Methods for Visualization and Analysis of High Dimensional Single-Cell RNA Sequencing Data.
Proceedings of the Biocomputing 2019: Proceedings of the Pacific Symposium, 2019

2018
Genetic Mutations Associated with Histopathology Changes in Kidney Cancer.
Proceedings of the AMIA 2018, 2018

2013
Gene co-expression analysis predicts genetic aberration loci associated with colon cancer metastasis.
Int. J. Comput. Biol. Drug Des., 2013

2012
Weighted Frequent Gene Co-expression Network Mining to Identify Genes Involved in Genome Stability.
PLoS Comput. Biol., 2012

2011
Predicting Parkinson's disease related genes using frequent gene co-expression analysis.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

Identifying smoking associated gene co-expression networks related to oral cancer initiation.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

2010
Using gene co-expression network analysis to predict biomarkers for chronic lymphocytic leukemia.
BMC Bioinform., 2010

Multi-dimensional discovery of biomarker and phenotype complexes.
BMC Bioinform., 2010

2009
Using Frequent Co-expression Network to Identify Gene Clusters for Breast Cancer Prognosis.
Proceedings of the International Joint Conferences on Bioinformatics, 2009


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