Philip R. O. Payne
Orcid: 0000-0002-9532-2998
According to our database1,
Philip R. O. Payne
authored at least 108 papers
between 2003 and 2024.
Collaborative distances:
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Bibliography
2024
sc2MeNetDrug: A computational tool to uncover inter-cell signaling targets and identify relevant drugs based on single cell RNA-seq data.
PLoS Comput. Biol., January, 2024
Highly Accurate Disease Diagnosis and Highly Reproducible Biomarker Identification with PathFormer.
CoRR, 2024
2023
J. Am. Medical Informatics Assoc., September, 2023
Multi-horizon predictive models for guiding extracorporeal resource allocation in critically ill COVID-19 patients.
J. Am. Medical Informatics Assoc., March, 2023
Improving Normative Modeling for Multi-modal Neuroimaging Data using mixture-of-product-of-experts variational autoencoders.
CoRR, 2023
Universal Normalization Enhanced Graph Representation Learning for Gene Network Prediction.
CoRR, 2023
Normative modeling using multimodal variational autoencoders to identify abnormal brain volume deviations in Alzheimer's disease.
Proceedings of the Medical Imaging 2023: Computer-Aided Diagnosis, 2023
Assisting Clinical Decisions for Scarcely Available Treatment via Disentangled Latent Representation.
Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2023
2022
Respiratory support status from EHR data for adult population: classification, heuristics, and usage in predictive modeling.
J. Am. Medical Informatics Assoc., 2022
Demonstrating an approach for evaluating synthetic geospatial and temporal epidemiologic data utility: results from analyzing >1.8 million SARS-CoV-2 tests in the United States National COVID Cohort Collaborative (N3C).
J. Am. Medical Informatics Assoc., 2022
Interpreting mechanism of Synergism of drug combinations using attention based hierarchical graph pooling.
CoRR, 2022
Self-explaining neural network with concept-based explanations for ICU mortality prediction.
Proceedings of the BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Northbrook, Illinois, USA, August 7, 2022
Proceedings of the AMIA 2022, 2022
2021
Computational analysis to repurpose drugs for COVID-19 based on transcriptional response of host cells to SARS-CoV-2.
BMC Medical Informatics Decis. Mak., 2021
A retrospective look at the predictions and recommendations from the 2009 AMIA policy meeting: did we see EHR-related clinician burnout coming?
J. Am. Medical Informatics Assoc., 2021
Use of electronic health records to support a public health response to the COVID-19 pandemic in the United States: a perspective from 15 academic medical centers.
J. Am. Medical Informatics Assoc., 2021
Conceptual considerations for using EHR-based activity logs to measure clinician burnout and its effects.
J. Am. Medical Informatics Assoc., 2021
The National COVID Cohort Collaborative (N3C): Rationale, design, infrastructure, and deployment.
J. Am. Medical Informatics Assoc., 2021
J. Am. Medical Informatics Assoc., 2021
Machine learning for modeling the progression of Alzheimer disease dementia using clinical data: a systematic literature review.
CoRR, 2021
BMC Bioinform., 2021
Proceedings of the 17th International Symposium on Spatial and Temporal Databases, 2021
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
Use of Healthcare Information Technology and Data Platforms to Inform Pandemic Response: Perspectives at the Intersection of Academic Healthcare Provider Organizations and Industry Partners.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
2020
npj Digit. Medicine, 2020
Language matters: precision health as a cross-cutting care, research and policy agenda.
J. Am. Medical Informatics Assoc., 2020
J. Am. Medical Informatics Assoc., 2020
Using REDCap and Apple ResearchKit to integrate patient questionnaires and clinical decision support into the electronic health record to improve sexually transmitted infection testing in the emergency department.
J. Am. Medical Informatics Assoc., 2020
Predicting Tumor Cell Response to Synergistic Drug Combinations Using a Novel Simplified Deep Learning Model.
Proceedings of the AMIA 2020, 2020
2019
Informatics-Enabled Learning Health Systems: Strategies for Success from Four Academic Medical Centers.
Proceedings of the AMIA 2019, 2019
Foundations for Studying Clinical Workflow: Development of a Composite Inter-Observer Reliability Assessment for Workflow Time Studies.
Proceedings of the AMIA 2019, 2019
2018
Synergistic Drug Combination Prediction by Integrating Multi-omics Data in Deep Learning Models.
CoRR, 2018
Diffusion mapping of drug targets on disease signaling network elements reveals drug combination strategies.
Proceedings of the Biocomputing 2018: Proceedings of the Pacific Symposium, 2018
Proceedings of the Biocomputing 2018: Proceedings of the Pacific Symposium, 2018
Proceedings of the Biocomputing 2018: Proceedings of the Pacific Symposium, 2018
Proceedings of the 2018 10th Computer Science and Electronic Engineering Conference, 2018
Panel: Collaborative Science Within Academic Medical Centers: Opportunities and Challenges for Informatics.
Proceedings of the AMIA 2018, 2018
2017
BMC Syst. Biol., 2017
Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017
Retrospective Analysis of EHR and Administrative Data for Drug Repurposing Hypothesis Evaluation in Melanoma.
Proceedings of the Summit on Clinical Research Informatics, 2017
Proceedings of the AMIA 2017, 2017
2016
Rethinking the role and impact of health information technology: informatics as an interventional discipline.
BMC Medical Informatics Decis. Mak., 2016
The geographic distribution of cardiovascular health in the stroke prevention in healthcare delivery environments (SPHERE) study.
J. Biomed. Informatics, 2016
Database J. Biol. Databases Curation, 2016
Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016
Using Karyotype Data for Automated Disease Classification: A Proof of Concept Demonstration.
Proceedings of the Summit on Clinical Research Informatics, 2016
Proceedings of the Summit on Clinical Research Informatics, 2016
2015
Conceptual Knowledge Discovery in Databases for Drug Combinations Predictions in Malignant Melanoma.
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015
Real-time Data Fusion Platforms: The Need of Multi-dimensional Data-driven Research in Biomedical Informatics.
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015
Proceedings of the AMIA 2015, 2015
A Novel Multiple Choice Question Generation Strategy: Alternative Uses for Controlled Vocabulary Thesauri in Biomedical-Sciences Education.
Proceedings of the AMIA 2015, 2015
Proceedings of the AMIA 2015, 2015
2014
Community-level determinants of obesity: harnessing the power of electronic health records for retrospective data analysis.
BMC Medical Informatics Decis. Mak., 2014
J. Biomed. Informatics, 2014
Advancing methodologies in Clinical Research Informatics (CRI): Foundational work for a maturing field.
J. Biomed. Informatics, 2014
Towards Symbiosis in Knowledge Representation and Natural Language Processing for Structuring Clinical Practice Guidelines.
Proceedings of the Nursing Informatics 2014 - East Meets West eSMART+, 2014
Lessons Learned Bringing Public Health into the Primary Care Clinic through an EHR-based Application.
Proceedings of the AMIA 2014, 2014
2013
People, organizational, and leadership factors impacting informatics support for clinical and translational research.
BMC Medical Informatics Decis. Mak., 2013
TimeCaT: a Comprehensive Tool for Time Motion Studies.
Proceedings of the MEDINFO 2013, 2013
Proceedings of the AMIA 2013, 2013
Enabling Integrative Auditing and Reporting for the TRITON Platform using Big Data Technologies.
Proceedings of the AMIA 2013, 2013
Inter-Observer Reliability Assessments in Time Motion Studies: The Foundation for Meaningful Clinical Workflow Analysis.
Proceedings of the AMIA 2013, 2013
Proceedings of the AMIA 2013, 2013
2012
Transactional Database Transformation and Its Application in Prioritizing Human Disease Genes.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012
Computational challenges and human factors influencing the design and use of clinical research participant eligibility pre-screening tools.
BMC Medical Informatics Decis. Mak., 2012
k-Neighborhood decentralization: A comprehensive solution to index the UMLS for large scale knowledge discovery.
J. Biomed. Informatics, 2012
Applying knowledge-anchored hypothesis discovery methods to advance clinical and translational research: the OAMiner project.
J. Am. Medical Informatics Assoc., 2012
Proceedings of the AMIA 2012, 2012
Time Capture Tool (TimeCaT): Development of a Comprehensive Application to Support Data Capture for Time Motion Studies.
Proceedings of the AMIA 2012, 2012
Proceedings of the AMIA 2012, 2012
Development of an Informatics-Based Predictive Model for 30-Day Readmission Customized for a Single Hospital System.
Proceedings of the AMIA 2012, 2012
2011
J. Biomed. Informatics, 2011
J. Biomed. Informatics, 2011
Research-IQ: Development and evaluation of an ontology-anchored integrative query tool.
J. Biomed. Informatics, 2011
J. Am. Medical Informatics Assoc., 2011
2010
Foundational biomedical informatics research in the clinical and translational science era: a call to action.
J. Am. Medical Informatics Assoc., 2010
Using gene co-expression network analysis to predict biomarkers for chronic lymphocytic leukemia.
BMC Bioinform., 2010
BMC Bioinform., 2010
2009
J. Digit. Imaging, 2009
Research Paper: Clinical Research Informatics: Challenges, Opportunities and Definition for an Emerging Domain.
J. Am. Medical Informatics Assoc., 2009
Proceedings of the 2009 IEEE International Conference on Bioinformatics and Biomedicine, 2009
2008
Proceedings of the Global Healthgrid: e-Science Meets Biomedical Informatics, 2008
Supporting the Design of Translational Clinical Studies through the Generation and Verification of Conceptual Knowledge-anchored Hypotheses.
Proceedings of the AMIA 2008, 2008
2007
J. Biomed. Informatics, 2007
A Day in the Life of a Clinical Research Coordinator: Observations from Community Practice Settings.
Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007
Modeling Participant-Related Clinical Research Events Using Conceptual Knowledge Acquisition Techniques.
Proceedings of the AMIA 2007, 2007
Identifying Challenges and Opportunities in Clinical Research Informatics: Analysis of a Facilitated Discussion at the 2006 AMIA Annual Symposium.
Proceedings of the AMIA 2007, 2007
2006
Proceedings of the Extended Abstracts Proceedings of the 2006 Conference on Human Factors in Computing Systems, 2006
Proceedings of the AMIA 2006, 2006
Proceedings of the AMIA 2006, 2006
Proceedings of the AMIA 2006, 2006
Proceedings of the AMIA 2006, 2006
Novel Techniques for Survey and Classification Studies to Improve Patient Centered Websites.
Proceedings of the AMIA 2006, 2006
2005
J. Am. Medical Informatics Assoc., 2005
2003
Proceedings of the AMIA 2003, 2003
CRC Clinical Trials Management System (CTMS): An Integrated Information Management Solution for Collaborative Clinical Research.
Proceedings of the AMIA 2003, 2003
CRC Tissue Core Management System (TCMS): Integration of Basic Science and Clinical Data for Translational Research.
Proceedings of the AMIA 2003, 2003