Jooyoung Lee

Orcid: 0000-0003-2654-712X

Affiliations:
  • Korea Institute for Advanced Study, School of Computational Sciences, Seoul, South Korea
  • Cornell University, Ithaca, NY, USA (1994 - 2000)
  • Florida State University, Tallahassee, FL, USA (1992 - 1994)
  • Argonne National Laboratory, IL, USA (1990 - 1992)
  • Brown University, Providence, RI, USA (PhD 1990)


According to our database1, Jooyoung Lee authored at least 23 papers between 1997 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of five.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2023
Application of conformational space annealing to the protein structure modeling using cryo-EM maps.
J. Comput. Chem., 2023

2020
Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13.
J. Chem. Inf. Model., 2020

2018
Conformational Space Annealing explained: A general optimization algorithm, with diverse applications.
Comput. Phys. Commun., 2018

2017
Protein Loop Structure Prediction Using Conformational Space Annealing.
J. Chem. Inf. Model., 2017

Ergodicity and model quality in template-restrained canonical and temperature/Hamiltonian replica exchange coarse-grained molecular dynamics simulations of proteins.
J. Comput. Chem., 2017

2016
Use of Restraints from Consensus Fragments of Multiple Server Models To Enhance Protein-Structure Prediction Capability of the UNRES Force Field.
J. Chem. Inf. Model., 2016

Ab initio materials design using conformational space annealing and its application to searching for direct band gap silicon crystals.
Comput. Phys. Commun., 2016

Link community detection through global optimization and the inverse resolution limit of partition density.
CoRR, 2016

2015
Prediction of Protein Structure by Template-Based Modeling Combined with the UNRES Force Field.
J. Chem. Inf. Model., 2015

Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest.
BMC Bioinform., 2015

Structure-based protein folding type classification and folding rate prediction.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014
Subgrouping Automata: Automatic sequence subgrouping using phylogenetic tree-based optimum subgrouping algorithm.
Comput. Biol. Chem., 2014

2012
Extraction of hidden information by efficient community detection in networks
CoRR, 2012

Mod-CSA: Modularity optimization by conformational space annealing
CoRR, 2012

2011
LigDockCSA: Protein-ligand docking using conformational space annealing.
J. Comput. Chem., 2011

2010
Dynamic folding pathway models of the villin headpiece subdomain (HP-36) structure.
J. Comput. Chem., 2010

2008
Re-examination of structure optimization of off-lattice protein AB models by conformational space annealing.
J. Comput. Chem., 2008

2006
Application of the multiensemble sampling to the equilibrium folding of proteins.
Bioinform., 2006

2005
An efficient molecular docking using conformational space annealing.
J. Comput. Chem., 2005

2002
Evolution of physics-based methodology for exploring the conformational energy landscape of proteins.
J. Comput. Chem., 2002

2000
UNRES: a united-residue force field for energy-based prediction of protein structure - orgin and significance of multibody terms.
Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, 2000

1999
Surmounting the Multiple-Minima Problem in Protein Folding.
J. Glob. Optim., 1999

1997
New optimization method for conformational energy calculations on polypeptides: Conformational space annealing.
J. Comput. Chem., 1997


  Loading...