Keehyoung Joo

According to our database, Keehyoung Joo authored at least 13 papers between 2008 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

DeepFold: enhancing protein structure prediction through optimized loss functions, improved template features, and re-optimized energy function.

Jae-Won Lee, Jong-Hyun Won, Seonggwang Jeon, Yujin Choo, Yubin Yeon, Jin-Seon Oh, Minsoo Kim, Seonhwa Kim, InSuk Joung, Cheongjae Jang, Sung Jong Lee, Tae Hyun Kim, Kyong Hwan Jin, Giltae Song, Eun-Sol Kim, Jejoong Yoo, Eunok Paek, Yung-Kyun Noh, Keehyoung Joo

Bioinform., December, 2023

Application of conformational space annealing to the protein structure modeling using cryo-EM maps.

Jimin Park, InSuk Joung, Keehyoung Joo, Jooyoung Lee

J. Comput. Chem., 2023

2020

Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13.

Agnieszka S. Karczynska, Karolina Zieba, Urszula Uciechowska, Magdalena A. Mozolewska, Pawel Krupa, Emilia A. Lubecka, Agnieszka G. Lipska, Celina Sikorska, Sergey A. Samsonov, Adam K. Sieradzan, Artur Gieldon, Adam Liwo, Rafal Slusarz, Magdalena Slusarz, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski

J. Chem. Inf. Model., 2020

2019

ConDo: protein domain boundary prediction using coevolutionary information.

Seung Hwan Hong, Keehyoung Joo, Jooyoung Lee

Bioinform., 2019

2018

Conformational Space Annealing explained: A general optimization algorithm, with diverse applications.

InSuk Joung, Jong Yun Kim, Steven P. Gross, Keehyoung Joo, Jooyoung Lee

Comput. Phys. Commun., 2018

2017

Protein Loop Structure Prediction Using Conformational Space Annealing.

Seungryong Heo, Juyong Lee, Keehyoung Joo, Hang-Cheol Shin, Jooyoung Lee

J. Chem. Inf. Model., 2017

Ergodicity and model quality in template-restrained canonical and temperature/Hamiltonian replica exchange coarse-grained molecular dynamics simulations of proteins.

Agnieszka S. Karczynska, Cezary Czaplewski, Pawel Krupa, Magdalena A. Mozolewska, Keehyoung Joo, Jooyoung Lee, Adam Liwo

J. Comput. Chem., 2017

2016

Use of Restraints from Consensus Fragments of Multiple Server Models To Enhance Protein-Structure Prediction Capability of the UNRES Force Field.

Magdalena A. Mozolewska, Pawel Krupa, Bartlomiej Zaborowski, Adam Liwo, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski

J. Chem. Inf. Model., 2016

2015

Prediction of Protein Structure by Template-Based Modeling Combined with the UNRES Force Field.

Pawel Krupa, Magdalena A. Mozolewska, Keehyoung Joo, Jooyoung Lee, Cezary Czaplewski, Adam Liwo

J. Chem. Inf. Model., 2015

Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest.

Juyong Lee, Kiho Lee, InSuk Joung, Keehyoung Joo, Bernard R. Brooks, Jooyoung Lee

BMC Bioinform., 2015

2014

Subgrouping Automata: Automatic sequence subgrouping using phylogenetic tree-based optimum subgrouping algorithm.

Joo-Hyun Seo, Jihyang Park, Eun-Mi Kim, Juhan Kim, Keehyoung Joo, Jooyoung Lee, Byung-Gee Kim

Comput. Biol. Chem., 2014

2012

A Visual Analytics Approach for Protein Disorder Prediction.

Jaegul Choo, Fuxin Li, Keehyoung Joo, Haesun Park

Proceedings of the Expanding the Frontiers of Visual Analytics and Visualization, 2012

2008

Re-examination of structure optimization of off-lattice protein AB models by conformational space annealing.

Jinwoo Lee, Keehyoung Joo, Seung-Yeon Kim, Jooyoung Lee

J. Comput. Chem., 2008