Joshua D. Welch

According to our database, Joshua D. Welch authored at least 7 papers between 2010 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

PyLiger: scalable single-cell multi-omic data integration in Python.

Lu Lu, Joshua D. Welch

Bioinform., 2022

Single-Cell Multi-omic Velocity Infers Dynamic and Decoupled Gene Regulation.

Chen Li, Maria Virgilio, Kathleen L. Collins, Joshua D. Welch

Proceedings of the Research in Computational Molecular Biology, 2022

Variational Mixtures of ODEs for Inferring Cellular Gene Expression Dynamics.

Yichen Gu, David T. Blaauw, Joshua D. Welch

Proceedings of the International Conference on Machine Learning, 2022

2020

Iterative Refinement of Cellular Identity from Single-Cell Data Using Online Learning.

Chao Gao, Joshua D. Welch

Proceedings of the Research in Computational Molecular Biology, 2020

2017

E Pluribus Unum: United States of Single Cells.

Joshua D. Welch, Alexander J. Hartemink, Jan F. Prins

Proceedings of the Research in Computational Molecular Biology, 2017

2016

SLICER: Inferring Branched, Nonlinear Cellular Trajectories from Single Cell RNA-seq Data.

Joshua D. Welch, Ziqing Liu, Li Wang, Junjie Lu, Paul Lerou, Jeremy E. Purvis, Li Qian, Alexander J. Hartemink, Jan F. Prins

Proceedings of the Research in Computational Molecular Biology - 20th Annual Conference, 2016

2010

WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures.

Jens Lichtenberg, Kyle Kurz, Xiaoyu Liang, Rami Al-ouran, Lev Neiman, Lee J. Nau, Joshua D. Welch, Edwin Jacox, Thomas Bitterman, Klaus Ecker, Laura Elnitski, Frank Drews, Stephen Lee, Lonnie R. Welch

BMC Bioinform., 2010