Lonnie R. Welch

According to our database1, Lonnie R. Welch authored at least 104 papers between 1992 and 2020.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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On csauthors.net:

Bibliography

2020
Ten simple rules for designing learning experiences that involve enhancing computational biology Wikipedia articles.
PLoS Comput. Biol., 2020

Set cover-based methods for motif selection.
Bioinform., 2020

2018
Discovering Gene Regulatory Elements Using Coverage-Based Heuristics.
IEEE ACM Trans. Comput. Biol. Bioinform., 2018

The development and application of bioinformatics core competencies to improve bioinformatics training and education.
PLoS Comput. Biol., 2018

Art in Science Competition invites artworks to the annual exhibition on ISMB 2018 in Chicago.
PLoS Comput. Biol., 2018

2017
Ten simple rules for forming a scientific professional society.
PLoS Comput. Biol., 2017

2016
Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee).
PLoS Comput. Biol., 2016

2014
Bioinformatics Curriculum Guidelines: Toward a Definition of Core Competencies.
PLoS Comput. Biol., 2014

The International Society of Computational Biology presents: the Great Lakes Bioinformatics Conference, May 16-18, 2014, Cincinnati, Ohio.
Bioinform., 2014

2012
A Report of the Curriculum Task Force of the ISCB Education Committee.
PLoS Comput. Biol., 2012

2011
AGRIS: the Arabidopsis Gene Regulatory Information Server, an update.
Nucleic Acids Res., 2011

2010
Scalable parallel word search in multicore/multiprocessor systems.
J. Supercomput., 2010

WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures.
BMC Bioinform., 2010

Regulatory network nodes of <i>check point factors</i> in DNA repair pathways.
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2009
A Concept for ab initio Prediction of cis-regulatory Modules.
Silico Biol., 2009

The SiteSeeker Motif Discovery Tool.
Silico Biol., 2009

2008
Discovery of Regulatory Elements in Oomycete Orthologs.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

Word-Based Characterization of the Bidirectional Promoters from the Human DNA-Repair Pathway.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

Scalable Parallel Word Search in Multi-Core/Multiprocessor Systems.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

2007
Application of bioinformatics and scalable computing to perform proteomic analysis of stomach tissue from diabetic mice.
Scalable Comput. Pract. Exp., 2007

New Frontiers in Computational Genomics: Identification of Novel Functional Elements and Genome-scale Pattern Analysis.
Scalable Comput. Pract. Exp., 2007

Verification of instrumentation techniques for resource management of real-time systems.
J. Syst. Softw., 2007

Characterizing robustness in dynamic real-time systems.
J. Syst. Softw., 2007

Guest Editor's introduction.
J. Syst. Softw., 2007

SiteSeeker - A Motif Discovery Tool.
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

2006
Adaptive resource management for dynamic distributed real-time applications.
J. Supercomput., 2006

Approximation algorithm for periodic real-time tasks with workload-dependent running-time functions.
Real Time Syst., 2006

2005
Integrated CORBA Scheduling and Resource Management for Distributed Real-Time Embedded Systems.
Proceedings of the 11th IEEE Real-Time and Embedded Technology and Applications Symposium (RTAS 2005), 2005

Stable Allocations in Distributed Real-Time Systems with Multiple Environmental Parameters and Replicable Applications.
Proceedings of the 19th International Parallel and Distributed Processing Symposium (IPDPS 2005), 2005

A Predictive, Decentralized Load Balancing Approach.
Proceedings of the 19th International Parallel and Distributed Processing Symposium (IPDPS 2005), 2005

Robust Task Allocation for Dynamic Distributed Real-Time Systems Subject to Multiple Environmental Parameters.
Proceedings of the 25th International Conference on Distributed Computing Systems (ICDCS 2005), 2005

Toward System Certification of Real-Time Resource Management Middleware.
Proceedings of The 2005 International Conference on Embedded Systems and Applications, 2005

2004
Agent-based computer vision in a dynamic, real-time environment.
Pattern Recognit., 2004

Heuristic Resource Allocation Algorithms for Maximizing Allowable Workload in Dynamic, Distributed Real-Time Systems.
Proceedings of the 18th International Parallel and Distributed Processing Symposium (IPDPS 2004), 2004

Quality-Based Adaptive Resource Management Architecture (QARMA): A CORBA Resource Management Service.
Proceedings of the 18th International Parallel and Distributed Processing Symposium (IPDPS 2004), 2004

Utility-Function Based Resource Allocation for Adaptable Applications in Dynamic, Distributed Real-Time Systems.
Proceedings of the 18th International Parallel and Distributed Processing Symposium (IPDPS 2004), 2004

2003
An Architecture and a General Optimization Framework for Resource Management in Dynamic, Distributed Real-Time Systems.
Proceedings of the 9th IEEE International Workshop on Object-Oriented Real-Time Dependable Systems (WORDS Fall 2003), 2003

A L2E-Based QoS Forecasting Algorithm for Dynamic, Distributed Real-Time Systems.
Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 2003

An Approach for On-line Performance Certification.
Proceedings of the 17th International Parallel and Distributed Processing Symposium (IPDPS 2003), 2003

The Applicability of Social Models for Self-Organizing Real-Time Systems.
Proceedings of the 17th International Parallel and Distributed Processing Symposium (IPDPS 2003), 2003

An Optimization Framework for Dynamic, Distributed Real-Time Systems.
Proceedings of the 17th International Parallel and Distributed Processing Symposium (IPDPS 2003), 2003

2002
Management of Application QOS-level Adaptation for Real-Time Systems.
Scalable Comput. Pract. Exp., 2002

Worst-Case Analysis for Real-Time Processes in Time-Sharing Environments.
Scalable Comput. Pract. Exp., 2002

A Framework for using benefit functions in complex real-time systems.
Scalable Comput. Pract. Exp., 2002

Collaborative Problem Solving Agent for on Board Real-Time Systems.
Proceedings of the 16th International Parallel and Distributed Processing Symposium (IPDPS 2002), 2002

An Efficient Schedulability Analysis Policing Technique for Periodic, Dynamic Real-Time Applications.
Proceedings of the 16th International Parallel and Distributed Processing Symposium (IPDPS 2002), 2002

Monitoring Network QoS in a Dynamic Real-Time System.
Proceedings of the 16th International Parallel and Distributed Processing Symposium (IPDPS 2002), 2002

A Framework for Using Benefit Functions In Complex Real Time Systems.
Proceedings of the 16th International Parallel and Distributed Processing Symposium (IPDPS 2002), 2002

Real-Time Performance Estimation for Dynamic, Distributed Real-Time Systems.
Proceedings of the Computational Science - ICCS 2002, 2002

2001
Security for Mission Critical Real-Time Systems.
Scalable Comput. Pract. Exp., 2001

Challenges for Building Complex Real-time Computing Systems.
Scalable Comput. Pract. Exp., 2001

Resource Management Middleware for Dynamic, Dependable Real-Time Systems.
Real Time Syst., 2001

Important Considerations for Execution time Analysis of Dynamic, Periodic Processes.
Proceedings of the 15th International Parallel & Distributed Processing Symposium (IPDPS-01), 2001

Toward a Realization of the Value of Benefit in Real-Time Systems.
Proceedings of the 15th International Parallel & Distributed Processing Symposium (IPDPS-01), 2001

A Dynamic, Real-Time Testbed for Resource Management Technology.
Proceedings of the 15th International Parallel & Distributed Processing Symposium (IPDPS-01), 2001

Towards a Characterization of Quality of Service Management Approaches in Distributed, Real-time Systems.
Proceedings of the 15th International Parallel & Distributed Processing Symposium (IPDPS-01), 2001

Specification and Modeling of Network Resources in Dynamic, Distributed Real-time System.
Proceedings of the ISCA 14th International Conference on Parallel and Distributed Computing Systems, 2001

2000
DynBench: A Benchmark Suite for Dynamic Real-Time Systems.
Scalable Comput. Pract. Exp., 2000

Load balancing for dynamic real-time systems.
Clust. Comput., 2000

Network Load Monitoring in Distributed Systems.
Proceedings of the Parallel and Distributed Processing, 2000

Accommodating QoS Prediction in an Adaptive Resource Management Framework.
Proceedings of the Parallel and Distributed Processing, 2000

Quality of Service Negotiation for Distributed, Dynamic Real-Time Systems.
Proceedings of the Parallel and Distributed Processing, 2000

Workshop on Embedded/Distributed HPC Systems and Applications (EHPC 2000).
Proceedings of the Parallel and Distributed Processing, 2000

Heterogeneous Resource Management for Dynamic Real-Time Systems.
Proceedings of the 9th Heterogeneous Computing Workshop, 2000

1999
Adaptive QoS and Resource Management using a Posteriori Workload Characterizations.
Proceedings of the Fifth IEEE Real-Time Technology and Applications Symposium, 1999

A Dynamic Real-Time Benchmark for Assessment of QoS and Resource Management Technology.
Proceedings of the Fifth IEEE Real-Time Technology and Applications Symposium, 1999

Distributed, Scalable, Dependable Real-Time Systems: Middleware Services and Applications.
Proceedings of the 13th International Parallel Processing Symposium / 10th Symposium on Parallel and Distributed Processing (IPPS / SPDP '99), 1999

A Distributed System Reference Architecture for Adaptive QoS and Resource Management.
Proceedings of the Parallel and Distributed Processing, 1999

DynBench: A Dynamic Benchmark Suite for Distributed Real-Time Systems.
Proceedings of the Parallel and Distributed Processing, 1999

1998
Engineering of Distributed Control Systems.
Scalable Comput. Pract. Exp., 1998

Open Problems in the Distributed Control Systems Domain.
Scalable Comput. Pract. Exp., 1998

Editorial.
Real Time Syst., 1998

Specification and Modeling of Dynamic, Distributed Real-Time Systems.
Proceedings of the 19th IEEE Real-Time Systems Symposium, 1998

A Resource Management Model for Dynamic, Scalable, Dependable, Real-Time Systems.
Proceedings of the Parallel and Distributed Processing, 10 IPPS/SPDP'98 Workshops Held in Conjunction with the 12th International Parallel Processing Symposium and 9th Symposium on Parallel and Distributed Processing, Orlando, Florida, USA, March 30, 1998

1997
Building Distributed Scalable Dependable Real-TimeSystems.
Proceedings of the 1997 Workshop on Engineering of Computer-Based Systems (ECBS '97), 1997

A toolset for the reengineering of complex computer systems.
Proceedings of the 1997 Workshop on Engineering of Computer-Based Systems (ECBS '97), 1997

1996
Guest editor's introduction: ACM OOPS Messenger special issue on object-oriented real-time systems.
OOPS Messenger, 1996

A metrics-driven approach for utilizing concurrency in object-oriented real-time systems.
OOPS Messenger, 1996

A taxonomy for distributed object-oriented real-time systems.
OOPS Messenger, 1996

Incorporating Temporal Considerations during Assignment and Pre-run-time Scheduling of Objects and Processes.
J. Parallel Distributed Comput., 1996

Special Issue on Object-Oriented Real-Time Systems: Guest Editor's Introduction.
J. Parallel Distributed Comput., 1996

Reverse Engineering of Computer-Based Control Systems.
Int. J. Softw. Eng. Knowl. Eng., 1996

Metrics for Quality and Concurrency in Object-Based Systems.
Ann. Softw. Eng., 1996

Exploiting parallelism in high performance embedded system scheduling.
Proceedings of the 3rd International Conference on High Performance Computing, 1996

Categorization of Programs Using Neural Networks.
Proceedings of the IEEE Symposium and Workshop on Engineering of Computer Based Systems (ECBS'96), 1996

Classifying Object-Oriented Real-time Systems: Ada 95 and Deal.
Proceedings of the IEEE Symposium and Workshop on Engineering of Computer Based Systems (ECBS'96), 1996

1995
A Model for Scheduling of Object-Based, Distributed Real-Time Systems.
Real Time Syst., 1995

Reengineering computer-based systems for enhanced concurrency and layering.
J. Syst. Softw., 1995

A Novel Approach to Off-line Scheduling in Real-Time Systems.
Informatica (Slovenia), 1995

Metrics for Assessment of Designs and Implementations During Reengineering of Computer-Based Systems.
Ann. Softw. Eng., 1995

Metrics and techniques for automatic partitioning and assignment of object-based concurrent programs.
Proceedings of the Seventh IEEE Symposium on Parallel and Distributed Processing, 1995

1994
A Parallel Virtual Machine for Programs Composed of Abstract Data Types.
IEEE Trans. Computers, 1994

Schedulability-Analyzable Exception Handling for Fault-Tolerant Real-Time Languages.
Real Time Syst., 1994

Response time prediction in object-based, parallel embedded systems.
Microprocess. Microprogramming, 1994

Program dependence analysis for concurrency exploitation in programs composed of abstract data type modules.
Proceedings of the Sixth IEEE Symposium on Parallel and Distributed Processing, 1994

Assignment and pre-run-time scheduling of object-based, parallel real-time processes.
Proceedings of the Sixth IEEE Symposium on Parallel and Distributed Processing, 1994

1993
On Specification of Reusable Software Components.
Int. J. Softw. Eng. Knowl. Eng., 1993

Cloning ADT Modules to Increase Parallelism: Rationale and Techniques.
Proceedings of the Fifth IEEE Symposium on Parallel and Distributed Processing, 1993

1992
Modeling Resource Contention Among Distributed Periodic Processes.
Proceedings of the Fourth IEEE Symposium on Parallel and Distributed Processing, 1992

Techniques for Complex Systems Development.
Proceedings of the Real Time Computing, 1992

Formal Methods and Algorithms for Parallel Real-Time Computing.
Proceedings of the Real Time Computing, 1992

The State-of-the-Art in Real-Time Computing.
Proceedings of the Real Time Computing, 1992

A Generic Systems Integration Framework for Large and Time-Critical Systems.
Proceedings of the Real Time Computing, 1992

Assignment of ADT Modules to Processors.
Proceedings of the 6th International Parallel Processing Symposium, 1992


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