Julie Bernauer

According to our database, Julie Bernauer authored at least 19 papers between 2006 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Software-defined, programmable L1 dataplane: demonstration of fabric hardware resilience using optical switches.

Giannis Patronas, Dimitris Syrivelis, Paraskevas Bakopoulos, Prethvi Kashinkunti, Louis Capps, Nikos Argyris, Nikos Terzenidis, Eitan Zahavi, Luke Yeager, Elad Mentovich, Julie Bernauer

Proceedings of the Optical Fiber Communications Conference and Exhibition, 2023

2022

Using DeepSpeed and Megatron to Train Megatron-Turing NLG 530B, A Large-Scale Generative Language Model.

Shaden Smith, Mostofa Patwary, Brandon Norick, Patrick LeGresley, Samyam Rajbhandari, Jared Casper, Zhun Liu, Shrimai Prabhumoye, George Zerveas, Vijay Korthikanti, Elton Zheng, Rewon Child, Reza Yazdani Aminabadi, Julie Bernauer, Xia Song, Mohammad Shoeybi, Yuxiong He, Michael Houston, Saurabh Tiwary, Bryan Catanzaro

CoRR, 2022

2021

Efficient Large-Scale Language Model Training on GPU Clusters.

Deepak Narayanan, Mohammad Shoeybi, Jared Casper, Patrick LeGresley, Mostofa Patwary, Vijay Korthikanti, Dmitri Vainbrand, Prethvi Kashinkunti, Julie Bernauer, Bryan Catanzaro, Amar Phanishayee, Matei Zaharia

CoRR, 2021

Efficient large-scale language model training on GPU clusters using megatron-LM.

Deepak Narayanan, Mohammad Shoeybi, Jared Casper, Patrick LeGresley, Mostofa Patwary, Vijay Korthikanti, Dmitri Vainbrand, Prethvi Kashinkunti, Julie Bernauer, Bryan Catanzaro, Amar Phanishayee, Matei Zaharia

Proceedings of the International Conference for High Performance Computing, 2021

2017

GARN2: coarse-grained prediction of 3D structure of large RNA molecules by regret minimization.

Mélanie Boudard, Dominique Barth, Julie Bernauer, Alain Denise, Johanne Cohen

Bioinform., 2017

NVIDIA Deep Learning Tutorial.

Julie Bernauer

Proceedings of the 2017 IEEE International Parallel and Distributed Processing Symposium, 2017

2016

Probing RNA Native Conformational Ensembles with Structural Constraints.

Rasmus Fonseca, Henry van den Bedem, Julie Bernauer

J. Comput. Biol., 2016

2015

Markov State Models Reveal a Two-Step Mechanism of miRNA Loading into the Human Argonaute Protein: Selective Binding followed by Structural Re-arrangement.

Hanlun Jiang, Fu Kit Sheong, Lizhe Zhu, Xin Gao, Julie Bernauer, Xuhui Huang

PLoS Comput. Biol., 2015

KGSrna: Efficient 3D Kinematics-Based Sampling for Nucleic Acids.

Rasmus Fonseca, Henry van den Bedem, Julie Bernauer

Proceedings of the Research in Computational Molecular Biology, 2015

Geometric and statistical methods for the analysis and prediction of structural interactions between biomolecules. (Méthodes géométriques et statistiques pour l'analyse et la prédiction des interactions structurales de biomolécules).

Julie Bernauer

, 2015

2014

Apprentissage de fonctions de tri pour la prédiction d'interactions protéine-ARN.

Adrien Guilhot-Gaudeffroy, Jérôme Azé, Julie Bernauer, Christine Froidevaux

Proceedings of the 14èmes Journées Francophones Extraction et Gestion des Connaissances, 2014

2012

Evaluating Mixture Models for Building RNA Knowledge-Based Potentials.

Adelene Y. L. Sim, Olivier Schwander, Michael Levitt, Julie Bernauer

J. Bioinform. Comput. Biol., 2012

Multiscale modeling of macromolecular biosystems.

Samuel Flores, Julie Bernauer, Seokmin Shin, Ruhong Zhou, Xuhui Huang

Briefings Bioinform., 2012

2010

ESBTL: efficient PDB parser and data structure for the structural and geometric analysis of biological macromolecules.

Sébastien Loriot, Frédéric Cazals, Julie Bernauer

Bioinform., 2010

Session Introduction.

Samuel Flores, Julie Bernauer, Xuhui Huang, Ruhong Zhou, Seokmin Shin

Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010

2009

Comparing Voronoi and Laguerre Tessellations in the Protein-Protein Docking Context.

Thomas Bourquard, Julie Bernauer, Jérôme Azé, Anne Poupon

Proceedings of the Sixth International Symposium on Voronoi Diagrams, 2009

2008

DiMoVo: a Voronoi tessellation-based method for discriminating crystallographic and biological protein-protein interactions.

Julie Bernauer, Ranjit Prasad Bahadur, Francis Rodier, Joël Janin, Anne Poupon

Bioinform., 2008

2007

A new protein-protein docking scoring function based on interface residue properties.

Julie Bernauer, Jérôme Azé, Joël Janin, Anne Poupon

Bioinform., 2007

2006

Utilisation de la tessellation de Voronoï pour l'étude des complexes protéine-protéine. (Using the Voronoi tesselation for the modeling of protein-protein complexes).

Julie Bernauer

PhD thesis, 2006