Lars Wienbrandt

According to our database, Lars Wienbrandt authored at least 25 papers between 2008 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

<i>EagleImp</i>: fast and accurate genome-wide phasing and imputation in a single tool.

Lars Wienbrandt, David Ellinghaus

Bioinform., November, 2022

2020

Network Aggregation to Enhance Results Derived from Multiple Analytics.

Diane Duroux, Héctor Climente-González, Lars Wienbrandt, Kristel Van Steen

Proceedings of the Artificial Intelligence Applications and Innovations, 2020

Reference-Based Haplotype Phasing with FPGAs.

Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus

Proceedings of the Computational Science - ICCS 2020, 2020

2019

1000× faster than PLINK: Combined FPGA and GPU accelerators for logistic regression-based detection of epistasis.

Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus

J. Comput. Sci., 2019

2018

1, 000x Faster Than PLINK: Genome-Wide Epistasis Detection with Logistic Regression Using Combined FPGA and GPU Accelerators.

Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus

Proceedings of the Computational Science - ICCS 2018, 2018

2017

Fast Genome-Wide Third-order SNP Interaction Tests with Information Gain on a Low-cost Heterogeneous Parallel FPGA-GPU Computing Architecture.

Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus

Proceedings of the International Conference on Computational Science, 2017

2016

FPGAs in Bioinformatics - Implementation and Evaluation of Common Bioinformatics Algorithms in Reconfigurable Logic.

Lars Wienbrandt

PhD thesis, 2016

Genome-Wide Association Interaction Studies with MB-MDR and maxT multiple testing correction on FPGAs.

Sven Gundlach, Jan Christian Kässens, Lars Wienbrandt

Proceedings of the International Conference on Computational Science 2016, 2016

Combining GPU and FPGA technology for efficient exhaustive interaction analysis in GWAS.

Jan Christian Kässens, Lars Wienbrandt, Manfred Schimmler, Jorge González-Domínguez, Bertil Schmidt

Proceedings of the 27th IEEE International Conference on Application-specific Systems, 2016

2015

Parallelizing Epistasis Detection in GWAS on FPGA and GPU-Accelerated Computing Systems.

Jorge González-Domínguez, Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus, Manfred Schimmler, Bertil Schmidt

IEEE ACM Trans. Comput. Biol. Bioinform., 2015

High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs.

Jan Christian Kässens, Lars Wienbrandt, Jorge González-Domínguez, Bertil Schmidt, Manfred Schimmler

J. Comput. Sci., 2015

Large-scale genome-wide association studies on a GPU cluster using a CUDA-accelerated PGAS programming model.

Jorge González-Domínguez, Jan Christian Kässens, Lars Wienbrandt, Bertil Schmidt

Int. J. High Perform. Comput. Appl., 2015

2014

An efficient implementation of PBKDF2 with RIPEMD-160 on multiple FPGAs.

Ayman Abbas, Rian Voss, Lars Wienbrandt, Manfred Schimmler

Proceedings of the 20th IEEE International Conference on Parallel and Distributed Systems, 2014

FPGA-based Acceleration of Detecting Statistical Epistasis in GWAS.

Lars Wienbrandt, Jan Christian Kässens, Jorge González-Domínguez, Bertil Schmidt, David Ellinghaus, Manfred Schimmler

Proceedings of the International Conference on Computational Science, 2014

Hybrid CPU/GPU Acceleration of Detection of 2-SNP Epistatic Interactions in GWAS.

Jorge González-Domínguez, Bertil Schmidt, Jan Christian Kässens, Lars Wienbrandt

Proceedings of the Euro-Par 2014 Parallel Processing, 2014

UPC++ for bioinformatics: A case study using genome-wide association studies.

Jan Christian Kässens, Jorge González-Domínguez, Lars Wienbrandt, Bertil Schmidt

Proceedings of the 2014 IEEE International Conference on Cluster Computing, 2014

The FPGA-Based High-Performance Computer RIVYERA for Applications in Bioinformatics.

Lars Wienbrandt

Proceedings of the Language, Life, Limits - 10th Conference on Computability in Europe, 2014

2012

An FPGA Implementation of an Investment Strategy Processor.

Christoph Starke, Vasco Grossmann, Lars Wienbrandt, Manfred Schimmler

Proceedings of the International Conference on Computational Science, 2012

Optimizing Investment Strategies with the Reconfigurable Hardware Platform RIVYERA.

Christoph Starke, Vasco Grossmann, Lars Wienbrandt, Sven Koschnicke, John Carstens, Manfred Schimmler

Int. J. Reconfigurable Comput., 2012

Improvement of BLASTp on the FPGA-Based High-Performance Computer RIVYERA.

Lars Wienbrandt, Daniel Siebert, Manfred Schimmler

Proceedings of the Bioinformatics Research and Applications - 8th International Symposium, 2012

Dictionary Attack on TrueCrypt with RIVYERA S3-5000.

Ayman Abbas, Claas Anders Rathje, Lars Wienbrandt, Manfred Schimmler

Proceedings of the 18th IEEE International Conference on Parallel and Distributed Systems, 2012

2011

Massively parallel FPGA-based implementation of BLASTp with the two-hit method.

Lars Wienbrandt, Stefan Baumgart, Jost Bissel, Florian Schatz, Manfred Schimmler

Proceedings of the International Conference on Computational Science, 2011

2010

Using the reconfigurable massively parallel architecture COPACOBANA 5000 for applications in bioinformatics.

Lars Wienbrandt, Stefan Baumgart, Jost Bissel, Carol May Yen Yeo, Manfred Schimmler

Proceedings of the International Conference on Computational Science, 2010

Collecting Statistical Information in DNA Sequences for the Detection of Special Motifs.

Lars Wienbrandt, Manfred Schimmler

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2010

2008

Massively Parallelized DNA Motif Search on the Reconfigurable Hardware Platform COPACOBANA.

Jan Schröder, Lars Wienbrandt, Gerd Pfeiffer, Manfred Schimmler

Proceedings of the Pattern Recognition in Bioinformatics, 2008