Liliana Florea

According to our database, Liliana Florea authored at least 15 papers between 2003 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2021

Jutils: a visualization toolkit for differential alternative splicing events.

Guangyu Yang, Leslie Cope, Zitong He, Liliana Florea

Bioinform., November, 2021

2018

Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer.

Bahman Afsari, Theresa Guo, Michael Considine, Liliana Florea, Luciane T. Kagohara, Genevieve L. Stein-O'Brien, Dylan Kelley, Emily Flam, Kristina D. Zambo, Patrick K. Ha, Donald Geman, Michael F. Ochs, Joseph A. Califano, Daria A. Gaykalova, Alexander V. Favorov, Elana J. Fertig

Bioinform., 2018

2016

JULiP: An efficient model for accurate intron selection from multiple RNA-seq samples.

Guangyu Yang, Liliana Florea

Proceedings of the 6th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2016

2013

Genome-Guided Transcriptome Assembly in the Age of Next-Generation Sequencing.

Liliana Florea, Steven L. Salzberg

IEEE ACM Trans. Comput. Biol. Bioinform., 2013

Thousands of exon skipping events differentiate among splicing patterns in sixteen human tissues.

Liliana Florea, Li Song, Steven L. Salzberg

F1000Research, 2013

CLASS: constrained transcript assembly of RNA-seq reads.

Li Song, Liliana Florea

BMC Bioinform., 2013

2011

Sim4db and Leaff: utilities for fast batch spliced alignment and sequence indexing.

Brian Walenz, Liliana Florea

Bioinform., 2011

2010

Spaced Seeds for Cross-species CDNA-to-genome Sequence Alignment.

Liliana Florea, Ingrid Mihai, Leming Zhou

Commun. Inf. Syst., 2010

2008

Universal seeds for cDNA-to-genome comparison.

Leming Zhou, Jonathan Stanton, Liliana Florea

BMC Bioinform., 2008

Effective cluster-based seed design for cross-species sequence comparisons.

Leming Zhou, Ingrid Mihai, Liliana Florea

Bioinform., 2008

2007

Designing Sensitive and Specific Spaced Seeds for Cross-Species mRNA-to-Genome Alignment.

Leming Zhou, Liliana Florea

J. Comput. Biol., 2007

2006

Bioinformatics of alternative splicing and its regulation.

Liliana Florea

Briefings Bioinform., 2006

2005

Finding Anchors for Genomic Sequence Comparison.

Ross A. Lippert, Xiaoyue Zhao, Liliana Florea, Clark M. Mobarry, Sorin Istrail

J. Comput. Biol., 2005

2003

EnteriX 2003: visualization tools for genome alignments of Enterobacteriaceae.

Liliana Florea, Michael McClelland, Cathy Riemer, Scott Schwartz, Webb Miller

Nucleic Acids Res., 2003

Epitope Prediction Algorithms for Peptide based Vaccine Design.

Liliana Florea, Bjarni V. Halldórsson, Oliver Kohlbacher, Russell Schwartz, Stephen Hoffman, Sorin Istrail

Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003