Mark S. Keller

According to our database, Mark S. Keller authored at least 10 papers between 2020 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

A Critical Analysis of the Usage of Dimensionality Reduction in Four Domains.

Dylan Cashman, Mark S. Keller, Hyeon Jeon, Bum Chul Kwon, Qianwen Wang

IEEE Trans. Vis. Comput. Graph., October, 2025

EasyVitessce: auto-magically adding interactivity to Scverse single-cell and spatial biology plots.

Selena Luo, Mark S. Keller, Tabassum Kakar, Lisa Choy, Nils Gehlenborg

CoRR, October, 2025

Interactive visualization of kidney micro-compartmental segmentations and associated pathomics on whole slide images.

Mark S. Keller, Nicholas J. Lucarelli, Yijiang Chen, Samuel P. Border, Andrew Janowczyk, Jonathan Himmelfarb, Matthias Kretzler, Jeffrey Hodgin, Laura Barisoni, Dawit Demeke, Leal Herlitz, Gilbert Moeckel, Avi Z. Rosenberg, Yanli Ding, Pinaki Sarder, Nils Gehlenborg

CoRR, October, 2025

scellop: A Scalable Redesign of Cell Population Plots for Single-Cell Data.

Thomas C. Smits, Nikolay Akhmetov, Tiffany S. Liaw, Mark S. Keller, Eric Mörth, Nils Gehlenborg

CoRR, October, 2025

The State of Single-Cell Atlas Data Visualization in the Biological Literature.

Mark S. Keller, Eric Mörth, Thomas C. Smits, Simon Warchol, Grace Guo, Qianwen Wang, Robert Krüger, Hanspeter Pfister, Nils Gehlenborg

IEEE Computer Graphics and Applications, 2025

2024

Use-Coordination: Model, Grammar, and Library for Implementation of Coordinated Multiple Views.

Mark S. Keller, Trevor Manz, Nils Gehlenborg

Proceedings of the IEEE Visualization and Visual Analytics, 2024

2023

Cistrome Explorer: an interactive visual analysis tool for large-scale epigenomic data.

Sehi L'Yi, Mark S. Keller, Ariaki Dandawate, Len Taing, Chen-Hao Chen, Myles Brown, Clifford A. Meyer, Nils Gehlenborg

Bioinform., February, 2023

Polyphony: an Interactive Transfer Learning Framework for Single-Cell Data Analysis.

Furui Cheng, Mark S. Keller, Huamin Qu, Nils Gehlenborg, Qianwen Wang

IEEE Trans. Vis. Comput. Graph., 2023

2022

SurvMaximin: Robust federated approach to transporting survival risk prediction models.

Xuan Wang, Harrison G. Zhang, Xin Xiong, Chuan Hong, Griffin M. Weber, Gabriel A. Brat, Clara-Lea Bonzel, Yuan Luo, Rui Duan, Nathan P. Palmer, Meghan R. Hutch, Alba Gutiérrez-Sacristán, Riccardo Bellazzi, Luca Chiovato, Kelly Cho, Arianna Dagliati, Hossein Estiri, Noelia García-Barrio, Romain Griffier, David A. Hanauer, Yuk-Lam Ho, John H. Holmes, Mark S. Keller, Jeffrey G. Klann, Sehi L'Yi, Sara Lozano-Zahonero, Sarah E. Maidlow, Adeline Makoudjou, Alberto Malovini, Bertrand Moal, Jason H. Moore, Michele Morris, Danielle L. Mowery, Shawn N. Murphy, Antoine Neuraz, Kee Yuan Ngiam, Gilbert S. Omenn, Lav P. Patel, Miguel Pedrera-Jiménez, Andrea Prunotto, Malarkodi J. Samayamuthu, Fernando J. Sanz Vidorreta, Emily Schriver, Petra Schubert, Pablo Serrano-Balazote, Andrew M. South, Amelia L. M. Tan, Byorn W. L. Tan, Valentina Tibollo, Patric Tippmann, Shyam Visweswaran, Zongqi Xia, William Yuan, Daniela Zöller, Isaac S. Kohane, Paul Avillach, Zijian Guo, Tianxi Cai

J. Biomed. Informatics, 2022

2020

International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium.

Gabriel A. Brat, Griffin M. Weber, Nils Gehlenborg, Paul Avillach, Nathan P. Palmer, Luca Chiovato, James J. Cimino, Lemuel R. Waitman, Gilbert S. Omenn, Alberto Malovini, Jason H. Moore, Brett K. Beaulieu-Jones, Valentina Tibollo, Shawn N. Murphy, Sehi L'Yi, Mark S. Keller, Riccardo Bellazzi, David A. Hanauer, Arnaud Serret-Larmande, Alba Gutiérrez-Sacristán, John J. Holmes, Douglas S. Bell, Kenneth D. Mandl, Robert W. Follett, Jeffrey G. Klann, Douglas A. Murad, Luigia Scudeller, Mauro Bucalo, Katie G. Kirchoff, Jean B. Craig, Jihad S. Obeid, Vianney Jouhet, Romain Griffier, Sébastien Cossin, Bertrand Moal, Lav P. Patel, Antonio Bellasi, Hans-Ulrich Prokosch, Detlef Kraska, Piotr Sliz, Amelia L. M. Tan, Kee Yuan Ngiam, Alberto Zambelli, Danielle L. Mowery, Emily Schriver, Batsal Devkota, Robert L. Bradford, Mohamad Daniar, Christel Daniel, Vincent Benoit, Romain Bey, Nicolas Paris, Patricia Serre, Nina Orlova, Julien Dubiel, Martin Hilka, Anne-Sophie Jannot, Stéphane Bréant, Judith Leblanc, Nicolas Griffon, Anita Burgun, Mélodie Bernaux, Arnaud Sandrin, Elisa Salamanca, Sylvie Cormont, Thomas Ganslandt, Tobias Gradinger, Julien Champ, Martin Boeker, Patricia Martel, Loic Estève, Alexandre Gramfort, Olivier Grisel, Damien Leprovost, Thomas Moreau, Gaël Varoquaux, Jill-Jênn Vie, Demian Wassermann, Arthur Mensch, Charlotte Caucheteux, Christian Haverkamp, Guillaume Lemaitre, Silvano Bosari, Ian D. Krantz, Andrew M. South, Tianxi Cai, Isaac S. Kohane

npj Digit. Medicine, 2020