Martin Beracochea

According to our database, Martin Beracochea authored at least 4 papers between 2020 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

The OMG dataset: An Open MetaGenomic corpus for mixed-modality genomic language modeling.

Andre Cornman, Jacob West-Roberts, Antonio Pedro Camargo, Simon Roux, Martin Beracochea, Milot Mirdita, Sergey Ovchinnikov, Yunha Hwang

Proceedings of the Thirteenth International Conference on Learning Representations, 2025

2023

MGnify: the microbiome sequence data analysis resource in 2023.

Lorna J. Richardson, Ben Allen, Germana Baldi, Martin Beracochea, Maxwell L. Bileschi, Tony Burdett, Josephine Burgin, Juan Caballero, Guy Cochrane, Lucy J. Colwell, Tom Curtis, Alejandra Escobar-Zepeda, Tatiana A. Gurbich, Varsha Kale, Anton I. Korobeynikov, Shriya Raj, Alexander B. Rogers, Ekaterina A. Sakharova, Santiago Sanchez, Darren J. Wilkinson, Robert D. Finn

Nucleic Acids Res., January, 2023

VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models.

Guillermo Rangel-Pineros, Alexandre Almeida, Martin Beracochea, Ekaterina A. Sakharova, Manja Marz, Alejandro Reyes, Martin Hölzer, Robert D. Finn

PLoS Comput. Biol., 2023

2020

MGnify: the microbiome analysis resource in 2020.

Alex L. Mitchell, Alexandre Almeida, Martin Beracochea, Miguel A. Boland, Josephine Burgin, Guy Cochrane, Michael R. Crusoe, Varsha Kale, Simon C. Potter, Lorna J. Richardson, Ekaterina A. Sakharova, Maxim Scheremetjew, Anton I. Korobeynikov, Alexander Shlemov, Olga Kunyavskaya, Alla L. Lapidus, Robert D. Finn

Nucleic Acids Res., 2020