Alex L. Mitchell

According to our database1, Alex L. Mitchell authored at least 29 papers between 2001 and 2019.

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In proceedings 
PhD thesis 


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The Evolution of Protein Family Databases.
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

InterPro in 2019: improving coverage, classification and access to protein sequence annotations.
Nucleic Acids Res., 2019

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.
Nucleic Acids Res., 2018

On the way to research objects for environmental genomics (or metagenomics).
Proceedings of Workshop on Research Objects (RO2018), 2018

InterPro in 2017 - beyond protein family and domain annotations.
Nucleic Acids Res., 2017

EBI metagenomics in 2016 - an expanding and evolving resource for the analysis and archiving of metagenomic data.
Nucleic Acids Res., 2016

HPMCD: the database of human microbial communities from metagenomic datasets and microbial reference genomes.
Nucleic Acids Res., 2016

The Pfam protein families database: towards a more sustainable future.
Nucleic Acids Res., 2016

GO annotation in InterPro: why stability does not indicate accuracy in a sea of changing annotations.
Database J. Biol. Databases Curation, 2016

Slim-o-matic: a Semi-Automated Way to Generate Gene Ontology Slims.
Proceedings of the 9th International Conference Semantic Web Applications and Tools for Life Sciences, 2016

The InterPro protein families database: the classification resource after 15 years.
Nucleic Acids Res., 2015

EBI metagenomics - a new resource for the analysis and archiving of metagenomic data.
Nucleic Acids Res., 2014

InterProScan 5: genome-scale protein function classification.
Bioinform., 2014

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains.
Nucleic Acids Res., 2013

InterPro in 2011: new developments in the family and domain prediction database.
Nucleic Acids Res., 2012

Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation.
Database J. Biol. Databases Curation, 2012

The PRINTS database: a fine-grained protein sequence annotation and analysis resource - its status in 2012.
Database J. Biol. Databases Curation, 2012

Metagenomic analysis: the challenge of the data bonanza.
Briefings Bioinform., 2012

InterPro: the integrative protein signature database.
Nucleic Acids Res., 2009

New developments in the InterPro database.
Nucleic Acids Res., 2007

Learning to extract relations for protein annotation.
Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007

InterPro, progress and status in 2005.
Nucleic Acids Res., 2005

METIS: multiple extraction techniques for informative sentences.
Bioinform., 2005

Classifying Protein Fingerprints.
Proceedings of the Knowledge Discovery in Databases: PKDD 2004, 2004

PRINTS and its automatic supplement, prePRINTS.
Nucleic Acids Res., 2003

PRECIS: Protein reports engineered from concise information in SWISS-PROT.
Bioinform., 2003

PRINTS and PRINTS-S shed light on protein ancestry.
Nucleic Acids Res., 2002

Toward More Intelligent Annotation Tools: A Prototype.
IEEE Intell. Syst., 2001

PRECIS: An Automated Pipeline for Producing Concise Reports About Proteins.
Proceedings of the 2nd IEEE International Symposium on Bioinformatics and Bioengineering, 2001