Matteo Tiberti

According to our database, Matteo Tiberti authored at least 11 papers between 2012 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Prediction of cancer driver genes and mutations: the potential of integrative computational frameworks.

Mona Nourbakhsh, Kristine Degn, Astrid Saksager, Matteo Tiberti, Elena Papaleo

Briefings Bioinform., January, 2024

2023

PDBminer to Find and Annotate Protein Structures for Computational Analysis.

Kristine Degn, Ludovica Beltrame, Matteo Tiberti, Elena Papaleo

J. Chem. Inf. Model., December, 2023

A workflow to study mechanistic indicators for driver gene prediction with Moonlight.

Mona Nourbakhsh, Astrid Saksager, Nikola Tom, Xi Steven Chen, Antonio Colaprico, Catharina Olsen, Matteo Tiberti, Elena Papaleo

Briefings Bioinform., September, 2023

PyInteraph2 and PyInKnife2 to Analyze Networks in Protein Structural Ensembles.

Valentina Sora, Matteo Tiberti, Ludovica Beltrame, Deniz Dogan, Shahriyar Mahdi Robbani, Joshua Rubin, Elena Papaleo

J. Chem. Inf. Model., July, 2023

2022

MutateX: an automated pipeline for <i>in silico</i> saturation mutagenesis of protein structures and structural ensembles.

Matteo Tiberti, Thilde Terkelsen, Kristine Degn, Ludovica Beltrame, Tycho Canter Cremers, Isabelle da Piedade, Miriam Di Marco, Emiliano Maiani, Elena Papaleo

Briefings Bioinform., 2022

2018

In silico identification of rescue sites by double force scanning.

Matteo Tiberti, Alessandro Pandini, Franca Fraternali, Arianna Fornili

Bioinform., 2018

2017

Allosteric modulation of cardiac myosin dynamics by omecamtiv mecarbil.

Shaima Hashem, Matteo Tiberti, Arianna Fornili

PLoS Comput. Biol., 2017

2015

ENCORE: Software for Quantitative Ensemble Comparison.

Matteo Tiberti, Elena Papaleo, Tone Bengtsen, Wouter Boomsma, Kresten Lindorff-Larsen

PLoS Comput. Biol., 2015

2014

Communication Routes in ARID Domains between Distal Residues in Helix 5 and the DNA-Binding Loops.

Gaetano Invernizzi, Matteo Tiberti, Matteo Lambrughi, Kresten Lindorff-Larsen, Elena Papaleo

PLoS Comput. Biol., 2014

PyInteraph: A Framework for the Analysis of Interaction Networks in Structural Ensembles of Proteins.

Matteo Tiberti, Gaetano Invernizzi, Matteo Lambrughi, Yuval Inbar, Gideon Schreiber, Elena Papaleo

J. Chem. Inf. Model., 2014

2012

xPyder: A PyMOL Plugin To Analyze Coupled Residues and Their Networks in Protein Structures.

Marco Pasi, Matteo Tiberti, Alberto Arrigoni, Elena Papaleo

J. Chem. Inf. Model., 2012