Michael T. Hallett

According to our database, Michael T. Hallett authored at least 35 papers between 1993 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2019

Reproducible Data Analysis Pipelines for Precision Medicine.

Bjørn Fjukstad, Vanessa Dumeaux, Michael T. Hallett, Lars Ailo Bongo

Proceedings of the 27th Euromicro International Conference on Parallel, 2019

2017

Interactions between the tumor and the blood systemic response of breast cancer patients.

Vanessa Dumeaux, Bjørn Fjukstad, Hans E. Fjosne, Jan-Ole Frantzen, Marit Muri Holmen, Enno Rodegerdts, Ellen Schlichting, Anne-Lise Børresen-Dale, Lars Ailo Bongo, Eiliv Lund, Michael T. Hallett

PLoS Comput. Biol., 2017

Building Applications for Interactive Data Exploration in Systems Biology.

Bjørn Fjukstad, Vanessa Dumeaux, Karina Standahl Olsen, Eiliv Lund, Michael T. Hallett, Lars Ailo Bongo

Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

2016

Structural and Functional Characterization of a <i>Caenorhabditis elegans</i> Genetic Interaction Network within Pathways.

Benjamin Boucher, Anna Y. Lee, Michael T. Hallett, Sarah Jenna

PLoS Comput. Biol., 2016

2011

Simultaneous Identification of Duplications and Lateral Gene Transfers.

Ali Tofigh, Michael T. Hallett, Jens Lagergren

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

2010

A Trade-Off between Sample Complexity and Computational Complexity in Learning Boolean Networks from Time-Series Data.

Theodore J. Perkins, Michael T. Hallett

IEEE ACM Trans. Comput. Biol. Bioinform., 2010

2007

A Faster FPT Algorithm for the Maximum Agreement Forest Problem.

Michael T. Hallett, Catherine McCartin

Theory Comput. Syst., 2007

Tools for visually exploring biological networks.

Matthew Suderman, Michael T. Hallett

Bioinform., 2007

2006

A Fixed-Parameter Approach to 2-Layer Planarization.

Vida Dujmovic, Michael R. Fellows, Michael T. Hallett, Matthew Kitching, Giuseppe Liotta, Catherine McCartin, Naomi Nishimura, Prabhakar Ragde, Frances A. Rosamond, Matthew Suderman, Sue Whitesides, David R. Wood

Algorithmica, 2006

2005

Refining Protein Subcellular Localization.

Michelle S. Scott, Sara J. Calafell, David Y. Thomas, Michael T. Hallett

PLoS Comput. Biol., 2005

BIAS: Bioinformatics Integrated Application Software.

Greg Finak, N. Godin, Michael T. Hallett, François Pepin, Z. Rajabi, V. Srivastava, Z. Tang

Bioinform., 2005

2004

Towards Quality Control for DNA Microarrays.

Kaleigh Smith, Michael T. Hallett

J. Comput. Biol., 2004

Ancestral Maximum Likelihood of Evolutionary Trees Is Hard.

Louigi Addario-Berry, Benny Chor, Michael T. Hallett, Jens Lagergren, Alessandro Panconesi, Todd Wareham

J. Bioinform. Comput. Biol., 2004

The Hera database and its use in the characterization of endoplasmic reticulum proteins.

Michelle S. Scott, Guoqing Lu, Michael T. Hallett, David Y. Thomas

Bioinform., 2004

Simultaneous identification of duplications and lateral transfers.

Michael T. Hallett, Jens Lagergren, Ali Tofigh

Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004

2003

DePIE: Designing Primers for Protein Interaction Experiments.

Guoqing Lu, Michael T. Hallett, Stephanie Pollock, David Y. Thomas

Nucleic Acids Res., 2003

Analogs & duals of the MAST problem for sequences & trees.

Michael R. Fellows, Michael T. Hallett, Ulrike Stege

J. Algorithms, 2003

Towards Identifying Lateral Gene Transfer Events.

Louigi Addario-Berry, Michael T. Hallett, Jens Lagergren

Proceedings of the 8th Pacific Symposium on Biocomputing, 2003

2001

Identifying the most significant pairwise correlations of residues in different positions of helices: the subset selection problem using least squares optimization.

Xianghong Zhou, Gareth Chelvanayagam, Michael T. Hallett

Proceedings of the 2001 ACM Symposium on Applied Computing (SAC), 2001

Efficient algorithms for lateral gene transfer problems.

Michael T. Hallett, Jens Lagergren

Proceedings of the Fifth Annual International Conference on Computational Biology, 2001

Dependable Computing in Virtual Laboratories.

Gustavo Alonso, Win Bausch, Cesare Pautasso, Ari Kahn, Michael T. Hallett

Proceedings of the 17th International Conference on Data Engineering, 2001

A Fixed-Parameter Approach to Two-Layer Planarization.

Vida Dujmovic, Michael R. Fellows, Michael T. Hallett, Matthew Kitching, Giuseppe Liotta, Catherine McCartin, Naomi Nishimura, Prabhakar Ragde, Frances A. Rosamond, Matthew Suderman, Sue Whitesides, David R. Wood

Proceedings of the Graph Drawing, 9th International Symposium, 2001

On the Parameterized Complexity of Layered Graph Drawing.

Vida Dujmovic, Michael R. Fellows, Michael T. Hallett, Matthew Kitching, Giuseppe Liotta, Catherine McCartin, Naomi Nishimura, Prabhakar Ragde, Frances A. Rosamond, Matthew Suderman, Sue Whitesides, David R. Wood

Proceedings of the Algorithms, 2001

2000

The hardness of perfect phylogeny, feasible register assignment and other problems on thin colored graphs.

Hans L. Bodlaender, Michael R. Fellows, Michael T. Hallett, Todd Wareham, Tandy J. Warnow

Theor. Comput. Sci., 2000

Darwin v. 2.0: an interpreted computer language for the biosciences.

Gaston H. Gonnet, Michael T. Hallett, Chantal Korostensky, Laurent Bernardin

Bioinform., 2000

A cross-comparison of a large dataset of genes.

Gina Cannarozzi, Michael T. Hallett, J. Norberg, Xianghong Zhou

Bioinform., 2000

New algorithms for the duplication-loss model.

Michael T. Hallett, Jens Lagergren

Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, 2000

Hunting for Functionally Analogous Genes.

Michael T. Hallett, Jens Lagergren

Proceedings of the Foundations of Software Technology and Theoretical Computer Science, 2000

1998

On the Multiple Gene Duplication Problem.

Michael R. Fellows, Michael T. Hallett, Ulrike Stege

Proceedings of the Algorithms and Computation, 9th International Symposium, 1998

Analogs and Duals of the MAST Problem for Sequences and Trees.

Michael R. Fellows, Michael T. Hallett, Chantal Korostensky, Ulrike Stege

Proceedings of the Algorithms, 1998

1995

Parameterized complexity analysis in computational biology.

Hans L. Bodlaender, Rodney G. Downey, Michael R. Fellows, Michael T. Hallett, Harold T. Wareham

Comput. Appl. Biosci., 1995

1994

A compendium of parameterized complexity results.

Michael T. Hallett, Todd Wareham

SIGACT News, 1994

Beyond NP-completeness for problems of bounded width: hardness for the W hierarchy.

Hans L. Bodlaender, Michael R. Fellows, Michael T. Hallett

Proceedings of the Twenty-Sixth Annual ACM Symposium on Theory of Computing, 1994

The Parameterized Complexity of Some Problems in Logic and Linguistics.

Michael T. Hallett, Harold T. Wareham

Proceedings of the Logical Foundations of Computer Science, Third International Symposium, 1994

1993

DNA Physical Mapping: Three Ways Difficult.

Michael R. Fellows, Michael T. Hallett, Harold T. Wareham

Proceedings of the Algorithms - ESA '93, First Annual European Symposium, Bad Honnef, Germany, September 30, 1993