Nikita Alexeev

According to our database, Nikita Alexeev authored at least 16 papers between 2014 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

Orienting Ordered Scaffolds: Complexity and Algorithms.

Sergey Aganezov, Pavel Avdeyev, Nikita Alexeev, Yongwu Rong, Max A. Alekseyev

SN Comput. Sci., 2022

PaReBrick: PArallel REarrangements and BReaks identification toolkit.

Alexey Zabelkin, Yulia Yakovleva, Olga Bochkareva, Nikita Alexeev

Bioinform., 2022

Chromothripsis Rearrangements Are Informed by 3D-Genome Organization.

Natalia Petukhova, Alexey Zabelkin, Vitaly Dravgelis, Sergey Aganezov, Nikita Alexeev

Proceedings of the Comparative Genomics - 19th International Conference, 2022

2020

Markov chain Monte Carlo for active module identification problem.

Nikita Alexeev, Javlon E. Isomurodov, Vladimir Sukhov, Gennady Korotkevich, Alexey A. Sergushichev

BMC Bioinform., 2020

A unified ILP framework for core ancestral genome reconstruction problems.

Pavel Avdeyev, Nikita Alexeev, Yongwu Rong, Max A. Alekseyev

Bioinform., 2020

2019

Recovering rearranged cancer chromosomes from karyotype graphs.

Sergey Aganezov, Ilya Zban, Vitaly Aksenov, Nikita Alexeev, Michael C. Schatz

BMC Bioinform., 2019

2018

Combinatorial Scoring of Phylogenetic Trees and Networks Based on Homoplasy-Free Characters.

Nikita Alexeev, Max A. Alekseyev

J. Comput. Biol., 2018

Estimation of the True Evolutionary Distance Under the INFER Model.

Alexey Zabelkin, Nikita Alexeev

Proceedings of the Comparative Genomics - 16th International Conference, 2018

2017

Generalized Hultman Numbers and Cycle Structures of Breakpoint Graphs.

Nikita Alexeev, Anna Pologova, Max A. Alekseyev

J. Comput. Biol., 2017

A Unified ILP Framework for Genome Median, Halving, and Aliquoting Problems Under DCJ.

Pavel Avdeyev, Nikita Alexeev, Yongwu Rong, Max A. Alekseyev

Proceedings of the Comparative Genomics - 15th International Workshop, 2017

2016

Comparative genomics meets topology: a novel view on genome median and halving problems.

Nikita Alexeev, Pavel Avdeyev, Max A. Alekseyev

BMC Bioinform., 2016

Combinatorial Scoring of Phylogenetic Networks.

Nikita Alexeev, Max A. Alekseyev

Proceedings of the Computing and Combinatorics - 22nd International Conference, 2016

2015

A Computational Method for the Rate Estimation of Evolutionary Transpositions.

Nikita Alexeev, Rustem Aidagulov, Max A. Alekseyev

Proceedings of the Bioinformatics and Biomedical Engineering, 2015

Estimation of the true evolutionary distance under the fragile breakage model.

Nikita Alexeev, Max A. Alekseyev

Proceedings of the 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2015

Generalized Hultman Numbers and the Distribution of Multi-break Distances.

Nikita Alexeev, Anna Pologova, Max A. Alekseyev

Proceedings of the Algorithms for Computational Biology, 2015

2014

Random Matrix Approach to the Distribution of Genomic Distance.

Nikita Alexeev, Peter Zograf

J. Comput. Biol., 2014