Pavel Avdeyev

According to our database, Pavel Avdeyev authored at least 11 papers between 2016 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Dirichlet Diffusion Score Model for Biological Sequence Generation.

Pavel Avdeyev, Chenlai Shi, Yuhao Tan, Kseniia Dudnyk, Jian Zhou

Proceedings of the International Conference on Machine Learning, 2023

2022

Orienting Ordered Scaffolds: Complexity and Algorithms.

Sergey Aganezov, Pavel Avdeyev, Nikita Alexeev, Yongwu Rong, Max A. Alekseyev

SN Comput. Sci., 2022

2021

Biological computation and computational biology: survey, challenges, and discussion.

Zaineb Chelly Dagdia, Pavel Avdeyev, Md. Shamsuzzoha Bayzid

Artif. Intell. Rev., 2021

2020

A unified ILP framework for core ancestral genome reconstruction problems.

Pavel Avdeyev, Nikita Alexeev, Yongwu Rong, Max A. Alekseyev

Bioinform., 2020

Linearization of Ancestral Genomes with Duplicated Genes.

Pavel Avdeyev, Max A. Alekseyev

Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020

2019

A Uniform Theory of Adequate Subgraphs for the Genome Median, Halving, and Aliquoting Problems.

Pavel Avdeyev, Maria Atamanova, Max A. Alekseyev

Proceedings of the Algorithms for Computational Biology - 6th International Conference, 2019

2018

A Rapid Exact Solution for the Guided Genome Halving Problem.

Anton Nekhai, Maria Atamanova, Pavel Avdeyev, Max A. Alekseyev

Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018

Implicit Transpositions in DCJ Scenarios.

Pavel Avdeyev, Shuai Jiang, Max A. Alekseyev

Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018

2017

A Unified ILP Framework for Genome Median, Halving, and Aliquoting Problems Under DCJ.

Pavel Avdeyev, Nikita Alexeev, Yongwu Rong, Max A. Alekseyev

Proceedings of the Comparative Genomics - 15th International Workshop, 2017

2016

Reconstruction of Ancestral Genomes in Presence of Gene Gain and Loss.

Pavel Avdeyev, Shuai Jiang, Sergey Aganezov Jr., Fei Hu, Max A. Alekseyev

J. Comput. Biol., 2016

Comparative genomics meets topology: a novel view on genome median and halving problems.

Nikita Alexeev, Pavel Avdeyev, Max A. Alekseyev

BMC Bioinform., 2016