Pedro Cotovio

According to our database, Pedro Cotovio authored at least 10 papers between 2022 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2026

Reinforcement-guided generative protein language models enable de novo design of highly diverse AAV capsids.

Lucas Ferraz, Ana F. Rodrigues, Pedro Giesteira Cotovio, Mafalda Ventura, Gabriela Silva, Ana Sofia Coroadinha, Miguel Machuqueiro, Catia Pesquita

CoRR, March, 2026

Exploring the limits of pre-trained embeddings in machine-guided protein design: a case study on predicting AAV vector viability.

Ana F. Rodrigues, Lucas Ferraz, Laura Balbi, Pedro Giesteira Cotovio, Catia Pesquita

CoRR, February, 2026

2025

Can Language Models Align Biomedical Ontologies?: Evaluating Retrieval-Augmented Prompt Strategies in Bio-ML.

Lucas Ferraz, Pedro Giesteira Cotovio, Catia Pesquita

Proceedings of the 8th Workshop on Semantic Web solutions for large-scale biomedical data analytics co-located with The ESWC 2025: Extended Semantic Web Conference (ESWC 2025), 2025

Matcha results in OAEI 2025.

Marta Contreiras Silva, Daniel Faria, Pedro Cotovio, Lucas Ferraz, Laura Balbi, Catia Pesquita

Proceedings of the 20th International Workshop on Ontology Matching co-located with the 24th International Semantic Web Conference (ISWC 2025), 2025

Results of the Ontology Alignment Evaluation Initiative 2025.

Mina Abd Nikooie Pour, Eva Blomqvist, Pedro Giesteira Cotovio, Adrien Coulet, Lucas Ferraz, Sven Hertling, Sarika Jain, Ernesto Jiménez-Ruiz, Felix Kraus, Patrick Lambrix, Huanyu Li, Ying Li, Xianhao Liu, Pierre Monnin, Heiko Paulheim, Catia Pesquita, Abhisek Sharma, Pavel Shvaiko, Marta Contreiras Silva, Guilherme Sousa, Cássia Trojahn, Jana Vatascinová, Beyza Yaman, Ondrej Zamazal, Lu Zhou

Proceedings of the 20th International Workshop on Ontology Matching co-located with the 24th International Semantic Web Conference (ISWC 2025), 2025

2024

Results of the Ontology Alignment Evaluation Initiative 2024.

Mina Abd Nikooie Pour, Alsayed Algergawy, Eva Blomqvist, Patrice Buche, Jiaoyan Chen, Adrien Coulet, Julien Cufi, Hang Dong, Daniel Faria, Lucas Ferraz, Pedro Giesteira Cotovio, Yuan He, Sven Hertling, Ian Horrocks, Liliana Ibanescu, Sarika Jain, Ernesto Jiménez-Ruiz, Naouel Karam, Felix Kraus, Patrick Lambrix, Huanyu Li, Ying Li, Pierre Monnin, Heiko Paulheim, Catia Pesquita, Abhisek Sharma, Pavel Shvaiko, Marta Contreiras Silva, Guilherme Sousa, Cássia Trojahn, Jana Vatascinová, Beyza Yaman, Ondrej Zamazal, Lu Zhou

Proceedings of the 19th International Workshop on Ontology Matching co-located with the 23rd International Semantic Web Conference (ISWC 2024), 2024

Results in OAEI 2024 for Matcha.

Daniel Faria, Marta Contreiras Silva, Pedro Cotovio, Lucas Ferraz, Laura Balbi, Catia Pesquita

Proceedings of the 19th International Workshop on Ontology Matching co-located with the 23rd International Semantic Web Conference (ISWC 2024), 2024

2023

What can knowledge graph alignment gain with Neuro-Symbolic learning approaches?

Pedro Giesteira Cotovio, Ernesto Jiménez-Ruiz, Catia Pesquita

CoRR, 2023

Results for Matcha and Matcha-DL in OAEI 2023.

Daniel Faria, Marta Contreiras Silva, Pedro Cotovio, Lucas Ferraz, Laura Balbi, Catia Pesquita

Proceedings of the 18th International Workshop on Ontology Matching co-located with the 22nd International Semantic Web Conference (ISWC 2023), 2023

2022

Matcha and Matcha-DL results for OAEI 2022.

Daniel Faria, Marta Contreiras Silva, Pedro Cotovio, Patrícia Eugénio, Catia Pesquita

Proceedings of the 17th International Workshop on Ontology Matching (OM 2022) co-located with the 21th International Semantic Web Conference (ISWC 2022), 2022