Peter Dittrich

According to our database1, Peter Dittrich authored at least 83 papers between 1998 and 2019.

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Bibliography

2019
Combining evolution and self-organization to find natural Boolean representations in unconventional computational media.
Biosyst., 2019

2018
Organisation-Oriented Coarse Graining and Refinement of Stochastic Reaction Networks.
IEEE/ACM Trans. Comput. Biology Bioinform., 2018

Towards measuring the semantic capacity of a physical medium demonstrated with elementary cellular automata.
Biosyst., 2018

2017
Evolutionary Design of Classifiers Made of Droplets Containing a Nonlinear Chemical Medium.
Evolutionary Computation, 2017

2016
Compressing molecular dynamics trajectories: Breaking the one-bit-per-sample barrier.
Journal of Computational Chemistry, 2016

Compressing molecular dynamics trajectories: breaking the one-bit-per-sample barrier.
CoRR, 2016

Formal Quantitative Analysis of Reaction Networks Using Chemical Organisation Theory.
Proceedings of the Computational Methods in Systems Biology, 2016

2015
Understanding Networks of Computing Chemical Droplet Neurons Based on Information Flow.
Int. J. Neural Syst., 2015

Towards rule-based metabolic databases: a requirement analysis based on KEGG.
IJDMB, 2015

Structural analysis of in silico mutant experiments of human inner-kinetochore structure.
Biosyst., 2015

Editorial.
Artificial Life, 2015

2014
Symbol representations and signal dynamics in evolving droplet computers.
Natural Computing, 2014

On logical universality of Belousov-Zhabotinsky vesicles.
Int. J. General Systems, 2014

Effects of small particle numbers on long-term behaviour in discrete biochemical systems.
Bioinformatics, 2014

Explorative Analysis of Heterogeneous, Unstructured, and Uncertain Data - A Computer Science Perspective on Biodiversity Research.
Proceedings of the DATA 2014, 2014

2013
Multi-scale Modelling of Computers Made from Excitable Chemical Droplets.
IJUC, 2013

Structure, function, and behaviour of computational models in systems biology.
BMC Systems Biology, 2013

Synthetic signalling protocell networks as models of neural computation.
Proceedings of the Twelfth European Conference on the Synthesis and Simulation of Living Systems: Advances in Artificial Life, 2013

2012
On architectures of circuits implemented in simulated Belousov-Zhabotinsky droplets.
Biosyst., 2012

Symbol Representations in Evolving Droplet Computers.
Proceedings of the Unconventional Computation and Natural Computation, 2012

2011
Biological and Chemical Information Technologies.
Proceedings of the 2nd European Future Technologies Conference and Exhibition, 2011

Artificial Wet Neuronal Networks from Compartmentalised Excitable Chemical Media.
ERCIM News, 2011

Fragments and Chemical Organisations.
Electr. Notes Theor. Comput. Sci., 2011

On the Relation between Organizations and Limit Sets in Chemical Reaction Systems.
Advances in Complex Systems, 2011

A decomposition theorem in chemical organizations.
Proceedings of the Advances in Artificial Life: 20th Anniversary Edition, 2011

Reaction flow artificial chemistries.
Proceedings of the Advances in Artificial Life: 20th Anniversary Edition, 2011

Organisation-Oriented Chemical Programming.
Proceedings of the Organic Computing - A Paradigm Shift for Complex Systems, 2011

On the Future of Chemistry-Inspired Computing.
Proceedings of the Organic Computing - A Paradigm Shift for Complex Systems, 2011

Emergent Control.
Proceedings of the Organic Computing - A Paradigm Shift for Complex Systems, 2011

2010
Rule-based spatial modeling with diffusing, geometrically constrained molecules.
BMC Bioinformatics, 2010

A parallel algorithm to compute chemical organizations in biological networks.
Bioinformatics, 2010

Feasibility of Organizations - A Refinement of Chemical Organization Theory with Application to P Systems.
Proceedings of the Membrane Computing, 2010

Using the SRSim Software for Spatial and Rule-Based Modeling of Combinatorially Complex Biochemical Reaction Systems.
Proceedings of the Membrane Computing, 2010

Organization Oriented Chemical Computing.
Proceedings of the Membrane Computing, 2010

Modelling Modified Atmosphere Packaging for Fruits and Vegetables using Membrane Systems.
Proceedings of the BIOSIGNALS 2010, 2010

On the Semantic Capacity of (Bio-)Chemical Systems.
Proceedings of the Artificial Life XII: Proceedings of the Twelfth International Conference on the Synthesis and Simulation of Living Systems, 2010

2009
ArtificialChemistry.
Proceedings of the Encyclopedia of Complexity and Systems Science, 2009

Developmental Robustness by Obligate Interaction of Class B Floral Homeotic Genes and Proteins.
PLoS Computational Biology, 2009

Organization-Oriented Chemical Programming of Distributed Artifacts.
IJNMC, 2009

Register Machine Computations on Binary Numbers by oscillating and Catalytic Chemical reactions Modelled Using Mass-Action kinetics.
Int. J. Found. Comput. Sci., 2009

In silico study of kinetochore control, amplification, and inhibition effects in MCC assembly.
Biosyst., 2009

Using chemical organization theory for model checking.
Bioinformatics, 2009

Artificial Chemistry.
Artificial Life, 2009

A Topological Approach to Chemical Organizations.
Artificial Life, 2009

Identifying Molecular Organic Codes in Reaction Networks.
Proceedings of the Advances in Artificial Life. Darwin Meets von Neumann, 2009

Flying over Mount Improbable.
Proceedings of the Advances in Artificial Life. Darwin Meets von Neumann, 2009

2008
Phenotype prediction in regulated metabolic networks.
BMC Systems Biology, 2008

Computing chemical organizations in biological networks.
Bioinformatics, 2008

Chemical Organizations in a Toy Model of the Political System.
Advances in Complex Systems, 2008

Event-Driven Metamorphoses of P Systems.
Proceedings of the Membrane Computing - 9th International Workshop, 2008

Enhancing Parameter Estimation of Biochemical Networks by Exponentially Scaled Search Steps.
Proceedings of the Evolutionary Computation, 2008

08421 Working Group: Uncertainty and Trust.
Proceedings of the Uncertainty Management in Information Systems, 12.10. - 17.10.2008, 2008

Biosignal-Based Computing By AHL Induced Synthetic Gene Regulatory Networks - From an in vivo Flip-Flop Implementation to Programmable Computing Agents.
Proceedings of the First International Conference on Biomedical Electronics and Devices, 2008

Tracking the Evolution of Chemical Computing Networks.
Proceedings of the Artificial Life XI: Proceedingshe of the Eleventh International Conference on the Synthesis and Simulation of Living Systems, 2008

Chemical organizations in living systems.
Proceedings of the Artificial Life XI: Proceedingshe of the Eleventh International Conference on the Synthesis and Simulation of Living Systems, 2008

2007
Toward Organization-Oriented Chemical Programming: A Case Study with the Maximal Independent Set Problem.
Proceedings of the Advances in Biologically Inspired Information Systems: Models, 2007

Stochastic effects in a compartmental model for mitotic checkpoint regulation.
J. Integrative Bioinformatics, 2007

Chemical Organization Theory as a Theoretical Base for Chemical Computing.
IJUC, 2007

Designing a chemical program using chemical organization theory.
BMC Systems Biology, 2007

How to formalise the meaning of a bio-model: a case study.
BMC Systems Biology, 2007

Hill Kinetics Meets P Systems: A Case Study on Gene Regulatory Networks as Computing Agents in silico and in vivo.
Proceedings of the Membrane Computing, 8th International Workshop, 2007

Organization-Oriented Chemical Programming.
Proceedings of the 7th International Conference on Hybrid Intelligent Systems (HIS 2007), 2007

Towards Evolutionary Network Reconstruction Tools for Systems Biology.
Proceedings of the Evolutionary Computation, 2007

Chemical Organizations at Different Spatial Scales.
Proceedings of the Advances in Artificial Life, 9th European Conference, 2007

2006
Chemical Organization Theory Applied to Virus Dynamics (Theorie chemischer Organisationen angewendet auf Infektionsmodelle).
it - Information Technology, 2006

Towards a Semantic Description of Bio-Models: Meaning Facets - A Case Study.
Proceedings of the Second International Symposium on Semantic Mining in Biomedicine, 2006

A Protein Substructure Based P System for Description and Analysis of Cell Signalling Networks.
Proceedings of the Membrane Computing, 7th International Workshop, 2006

SOGOS - A Distributed Meta Level Architecture for the Self-Organizing Grid of Services.
Proceedings of the 7th International Conference on Mobile Data Management (MDM 2006), 2006

Organization-oriented chemical programming for the organic design of distributed computing systems.
Proceedings of the 1st International ICST Conference on Bio Inspired Models of Network, 2006

2005
The Bio-Chemical Information Processing Metaphor as a Programming Paradigm for Organic Computing.
Proceedings of the 18th International Conference on Architecture of Computing Systems, 2005

2004
Dynamic Subset Selection Based on a Fitness Case Topology.
Evolutionary Computation, 2004

Chemical Computing.
Proceedings of the Unconventional Programming Paradigms, 2004

Self-Adaptive Scouting - Autonomous Experimentation for Systems Biology.
Proceedings of the Applications of Evolutionary Computing, 2004

2003
On the Scalability of Social Order: Modeling the Problem of Double and Multi Contingency Following Luhmann.
J. Artificial Societies and Social Simulation, 2003

Artificial Life as an Aid to Astrobiology: Testing Life Seeking Techniques.
Proceedings of the Advances in Artificial Life, 7th European Conference, 2003

2001
Artificial Chemistries-A Review.
Artificial Life, 2001

Spontaneous Formation of Proto-cells in an Universal Artificial Chemistry on a Planar Graph.
Proceedings of the Advances in Artificial Life, 6th European Conference, 2001

Survival of the Unfittest? - The Seceder Model and Its Fitness Landscape.
Proceedings of the Advances in Artificial Life, 6th European Conference, 2001

2000
Künstliche Chemie.
KI, 2000

1999
Dynamical Properties of the Fitness Landscape of a GP Controlled Random Morphology Robot.
Proceedings of the Genetic and Evolutionary Computation Conference (GECCO 1999), 1999

Meta-Evolution in Graph GP.
Proceedings of the Genetic Programming, 1999

1998
Self-Evolution in a Constructive Binary String System.
Artificial Life, 1998

Learning to Move a Robot with Random Morphology.
Proceedings of the Evolutionary Robotics, First European Workshop, 1998


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