Ramón Díaz-Uriarte

According to our database1, Ramón Díaz-Uriarte
  • authored at least 27 papers between 2003 and 2018.
  • has a "Dijkstra number"2 of five.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
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Links

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Bibliography

2018
Cancer progression models and fitness landscapes: a many-to-many relationship.
Bioinformatics, 2018

2017
OncoSimulR: genetic simulation with arbitrary epistasis and mutator genes in asexual populations.
Bioinformatics, 2017

2015
Identifying restrictions in the order of accumulation of mutations during tumor progression: effects of passengers, evolutionary models, and sampling.
BMC Bioinformatics, 2015

2014
ADaCGH2: parallelized analysis of (big) CNA data.
Bioinformatics, 2014

2010
waviCGH: a web application for the analysis and visualization of genomic copy number alterations.
Nucleic Acids Research, 2010

2009
Pomelo II: finding differentially expressed genes.
Nucleic Acids Research, 2009

Detection of recurrent copy number alterations in the genome: taking among-subject heterogeneity seriously.
BMC Bioinformatics, 2009

RJaCGH: Bayesian analysis of aCGH arrays for detecting copy number changes and recurrent regions.
Bioinformatics, 2009

2008
PaLS: filtering common literature, biological terms and pathway information.
Nucleic Acids Research, 2008

SignS: a parallelized, open-source, freely available, web-based tool for gene selection and molecular signatures for survival and censored data.
BMC Bioinformatics, 2008

2007
Flexible and Accurate Detection of Genomic Copy-Number Changes from aCGH.
PLoS Computational Biology, 2007

Asterias: integrated analysis of expression and aCGH data using an open-source, web-based, parallelized software suite.
Nucleic Acids Research, 2007

A response to Yu et al. "A forward-backward fragment assembling algorithm for the identification of genomic amplification and deletion breakpoints using high-density single nucleotide polymorphism (SNP) array", BMC Bioinformatics 2007, 8: 145.
BMC Bioinformatics, 2007

GeneSrF and varSelRF: a web-based tool and R package for gene selection and classification using random forest.
BMC Bioinformatics, 2007

IDconverter and IDClight: Conversion and annotation of gene and protein IDs.
BMC Bioinformatics, 2007

2006
Gene selection and classification of microarray data using random forest.
BMC Bioinformatics, 2006

2005
GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data.
Nucleic Acids Research, 2005

Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information.
Bioinformatics, 2005

2004
New challenges in gene expression data analysis and the extended GEPAS.
Nucleic Acids Research, 2004

DNMAD: web-based diagnosis and normalization for microarray data.
Bioinformatics, 2004

FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes.
Bioinformatics, 2004

New Challenges in Gene Expression Data Analysis and the Extended GEPAS.
Proceedings of the 5th Annual Spanish Bioinformatics Conference, Barcelona, Catalonia, 2004

Can we Find Molecular Signatures from Gene Expression Data?
Proceedings of the 5th Annual Spanish Bioinformatics Conference, Barcelona, Catalonia, 2004

Variable Selection from Random Forests: Application to Gene Expression Data.
Proceedings of the 5th Annual Spanish Bioinformatics Conference, Barcelona, Catalonia, 2004

2003
GEPAS: a web-based resource for microarray gene expression data analysis.
Nucleic Acids Research, 2003

Gene expression data preprocessing.
Bioinformatics, 2003

Using gene ontology on genome-scale studies to find significant associations of biologically relevant terms to groups of genes.
Proceedings of the NNSP 2003, 2003


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