Mariana L. Neves

Orcid: 0000-0002-6488-2394

Affiliations:
  • German Federal Institute for Risk Assessment, Berlin, Germany
  • Hasso Plattner Institute, Potsdam, Germany (2013 - 2017)
  • Humboldt University Berlin, Department of Computer Science, Germany (former)
  • Complutense University of Madrid, Faculty of Computer Science, Spain (PhD 2012)


According to our database1, Mariana L. Neves authored at least 49 papers between 2001 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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Online presence:

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Bibliography

2023
Automatic classification of experimental models in biomedical literature to support searching for alternative methods to animal experiments.
J. Biomed. Semant., December, 2023

Findings of the WMT 2023 Biomedical Translation Shared Task: Evaluation of ChatGPT 3.5 as a Comparison System.
Proceedings of the Eighth Conference on Machine Translation, 2023

Bf3R at SemEval-2023 Task 7: a text similarity model for textual entailment and evidence retrieval in clinical trials and animal studies.
Proceedings of the The 17th International Workshop on Semantic Evaluation, 2023

Is the ranking of PubMed similar articles good enough? An evaluation of text similarity methods for three datasets.
Proceedings of the 22nd Workshop on Biomedical Natural Language Processing and BioNLP Shared Tasks, 2023

2022

2021
An extensive review of tools for manual annotation of documents.
Briefings Bioinform., 2021

Findings of the WMT 2021 Biomedical Translation Shared Task: Summaries of Animal Experiments as New Test Set.
Proceedings of the Sixth Conference on Machine Translation, 2021

Argumentation Mining in Scientific Literature: From Computational Linguistics to Biomedicine.
Proceedings of the 11th International Workshop on Bibliometric-enhanced Information Retrieval co-located with 43rd European Conference on Information Retrieval (ECIR 2021), 2021

2020
Annotationsaurus: A Searchable Directory of Annotation Tools.
CoRR, 2020

Findings of the WMT 2020 Biomedical Translation Shared Task: Basque, Italian and Russian as New Additional Languages.
Proceedings of the Fifth Conference on Machine Translation, 2020

MEDLINE as a Parallel Corpus: a Survey to Gain Insight on French-, Spanish- and Portuguese-speaking Authors' Abstract Writing Practice.
Proceedings of The 12th Language Resources and Evaluation Conference, 2020

2019
Findings of the WMT 2019 Biomedical Translation Shared Task: Evaluation for MEDLINE Abstracts and Biomedical Terminologies.
Proceedings of the Fourth Conference on Machine Translation, 2019

CLEF eHealth 2019 Evaluation Lab.
Proceedings of the Advances in Information Retrieval, 2019

Overview of the CLEF eHealth 2019 Multilingual Information Extraction.
Proceedings of the Working Notes of CLEF 2019, 2019

Overview of the CLEF eHealth Evaluation Lab 2019.
Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2019

Evaluation of Scientific Elements for Text Similarity in Biomedical Publications.
Proceedings of the 6th Workshop on Argument Mining, ArgMining@ACL 2019, Florence, Italy, 2019

2018
Findings of the WMT 2018 Biomedical Translation Shared Task: Evaluation on Medline test sets.
Proceedings of the Third Conference on Machine Translation: Shared Task Papers, 2018

Bf3R at SemEval-2018 Task 7: Evaluating Two Relation Extraction Tools for Finding Semantic Relations in Biomedical Abstracts.
Proceedings of The 12th International Workshop on Semantic Evaluation, 2018

Parallel Corpora for the Biomedical Domain.
Proceedings of the Eleventh International Conference on Language Resources and Evaluation, 2018

RDF2PT: Generating Brazilian Portuguese Texts from RDF Data.
Proceedings of the Eleventh International Conference on Language Resources and Evaluation, 2018

2017
Olelo: a web application for intuitive exploration of biomedical literature.
Nucleic Acids Res., 2017

Deep learning with word embeddings improves biomedical named entity recognition.
Bioinform., 2017

Findings of the WMT 2017 Biomedical Translation Shared Task.
Proceedings of the Second Conference on Machine Translation, 2017

Neural Domain Adaptation for Biomedical Question Answering.
Proceedings of the 21st Conference on Computational Natural Language Learning (CoNLL 2017), 2017

Neural Question Answering at BioASQ 5B.
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

Assessing the performance of Olelo, a real-time biomedical question answering application.
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

Olelo: A Question Answering Application for Biomedicine.
Proceedings of the 55th Annual Meeting of the Association for Computational Linguistics, 2017

A parallel collection of clinical trials in Portuguese and English.
Proceedings of the 10th Workshop on Building and Using Comparable Corpora, 2017

2016

TextAI: Enhancing TextAE with Intelligent Annotation Support.
Proceedings of the 7th International Symposium on Semantic Mining in Biomedicine, 2016

The Scielo Corpus: a Parallel Corpus of Scientific Publications for Biomedicine.
Proceedings of the Tenth International Conference on Language Resources and Evaluation LREC 2016, 2016

Entity-Supported Summarization of Biomedical Abstracts.
Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining, 2016

2015
HPI Question Answering System in the BioASQ 2015 Challenge.
Proceedings of the Working Notes of CLEF 2015, 2015

2014
CellFinder: a cell data repository.
Nucleic Acids Res., 2014

An analysis on the entity annotations in biological corpora.
F1000Research, 2014

BioC interoperability track overview.
Database J. Biol. Databases Curation, 2014

A survey on annotation tools for the biomedical literature.
Briefings Bioinform., 2014

HPI in-memory-based Database System in Task 2b of BioASQ.
Proceedings of the Working Notes for CLEF 2014 Conference, 2014

Applying In-Memory Technology for Automatic Template Filling in the Clinical Domain.
Proceedings of the Working Notes for CLEF 2014 Conference, 2014

2013
Preliminary evaluation of the CellFinder literature curation pipeline for gene expression in kidney cells and anatomical parts.
Database J. Biol. Databases Curation, 2013

WBI-DDI: Drug-Drug Interaction Extraction using Majority Voting.
Proceedings of the 7th International Workshop on Semantic Evaluation, 2013

2011
U-Compare bio-event meta-service: compatible BioNLP event extraction services.
BMC Bioinform., 2011

Assessment of NER solutions against the first and second CALBC Silver Standard Corpus.
J. Biomed. Semant., 2011

2010
Moara: a Java library for extracting and normalizing gene and protein mentions.
BMC Bioinform., 2010

2009
Extraction of biomedical events using case-based reasoning.
Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task, BioNLP@HLT-NAACL 2009, 2009

2008
Extracting and Normalizing Gene/Protein Mentions with the Flexible and Trainable Moara Java Library.
Proceedings of the Linking Literature, Information, and Knowledge for Biology, 2008

CBR-Tagger: a case-based reasoning approach to the gene/protein mention problem.
Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing, 2008

2007
Asterias: integrated analysis of expression and aCGH data using an open-source, web-based, parallelized software suite.
Nucleic Acids Res., 2007

2001
Citationfinder: a knowledge-based system for web pages of citations classification.
Proceedings of the IEEE International Conference on Systems, 2001


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