Reinhard Guthke

According to our database, Reinhard Guthke authored at least 30 papers between 1999 and 2018.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2018

Module-detection approaches for the integration of multilevel omics data highlight the comprehensive response of Aspergillus fumigatus to caspofungin.

Theresia Conrad, Olaf Kniemeyer, Sebastian Henkel, Thomas Krüger, D. J. Mattern, Vito Valiante, Reinhard Guthke, I. D. Jacobsen, Axel A. Brakhage, Sebastian Vlaic, Jörg Linde

BMC Syst. Biol., 2018

2016

Inference of Predictive Phospho-regulatory Networks from LC-MS/MS Phosphoproteomics Data.

Sebastian Vlaic, Robert Altwasser, Peter Kupfer, Carol L. Nilsson, Mark R. Emmett, Anke Meyer-Baese, Reinhard Guthke

Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2016), 2016

2015

FungiFun2: a comprehensive online resource for systematic analysis of gene lists from fungal species.

Steffen Priebe, Christian Kreisel, Fabian Horn, Reinhard Guthke, Jörg Linde

Bioinform., 2015

2014

Within-host influenza dynamics: A small-scale mathematical modeling approach.

Himanshu Manchanda, Nora Seidel, Andi Krumbholz, Andreas Sauerbrei, Michaela Schmidtke, Reinhard Guthke

Biosyst., 2014

2013

Dynamic modelling of microRNA regulation during mesenchymal stem cell differentiation.

Michael Weber, Ana M. Sotoca, Peter Kupfer, Reinhard Guthke, Everardus J. van Zoelen

BMC Syst. Biol., 2013

Inference of dynamical gene-regulatory networks based on time-resolved multi-stimuli multi-experiment data applying NetGenerator V2.0.

Michael Weber, Sebastian Henkel, Sebastian Vlaic, Reinhard Guthke, Everardus J. van Zoelen, Dominik Driesch

BMC Syst. Biol., 2013

Different Stimuli for Inference of Gene Regulatory Network in Rheumatoid Arthritis.

Peter Kupfer, Sebastian Vlaic, René Huber, Raimund W. Kinne, Reinhard Guthke

Proceedings of the BIOINFORMATICS 2013 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Barcelona, Spain, 11, 2013

2012

The extended TILAR approach: a novel tool for dynamic modeling of the transcription factor network regulating the adaption to in vitro cultivation of murine hepatocytes.

Sebastian Vlaic, Wolfgang Schmidt-Heck, Madlen Matz-Soja, Eugenia Marbach, Jörg Linde, Anke Meyer-Baese, Sebastian Zellmer, Reinhard Guthke, Rolf Gebhardt

BMC Syst. Biol., 2012

Regulatory interactions for iron homeostasis in Aspergillus fumigatus inferred by a Systems Biology approach.

Jörg Linde, Peter Hortschansky, Eugen Fazius, Axel A. Brakhage, Reinhard Guthke, Hubertus Haas

BMC Syst. Biol., 2012

2011

<i>In Silico</i> Evidence for Gluconeogenesis from Fatty Acids in Humans.

Christoph Kaleta, Luis F. de Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow, Stefan Schuster

PLoS Comput. Biol., 2011

More than just a metabolic regulator - elucidation and validation of new targets of PdhR in Escherichia coli.

Anna-Katharina Göhler, Öznur Kökpinar, Wolfgang Schmidt-Heck, Robert Geffers, Reinhard Guthke, Ursula Rinas, Stefan Schuster, Knut Jahreis, Christoph Kaleta

BMC Syst. Biol., 2011

2010

Regulatory network modelling of iron acquisition by a fungal pathogen in contact with epithelial cells.

Jörg Linde, Duncan Wilson, Bernhard Hube, Reinhard Guthke

BMC Syst. Biol., 2010

Integrative inference of gene-regulatory networks in Escherichia coli using information theoretic concepts and sequence analysis.

Christoph Kaleta, Anna-Katharina Göhler, Stefan Schuster, Knut Jahreis, Reinhard Guthke, Swetlana Nikolajewa

BMC Syst. Biol., 2010

Network Inference by Considering Multiple Objectives: Insights from In Vivo Transcriptomic Data Generated by a Synthetic Network.

Sandro Lambeck, Andreas Dräger, Reinhard Guthke

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2010

2009

Adapted Boolean network models for extracellular matrix formation.

Johannes Wollbold, René Huber, Dirk Pohlers, Dirk Koczan, Reinhard Guthke, Raimund W. Kinne, Ulrike Gausmann

BMC Syst. Biol., 2009

Integrative modeling of transcriptional regulation in response to antirheumatic therapy.

Michael Hecker, Robert Hermann Goertsches, Robby Engelmann, Hans-Jürgen Thiesen, Reinhard Guthke

BMC Bioinform., 2009

Gene regulatory network inference: Data integration in dynamic models - A review.

Michael Hecker, Sandro Lambeck, Susanne Töpfer, Eugene P. van Someren, Reinhard Guthke

Biosyst., 2009

2008

Constructing a Knowledge Base for Gene Regulatory Dynamics by Formal Concept Analysis Methods.

Johannes Wollbold, Reinhard Guthke, Bernhard Ganter

Proceedings of the Algebraic Biology, Third International Conference, 2008

2007

Integration of Transcriptome and Proteome Data from Human-Pathogenic Fungi by Using a Data Warehouse.

Daniela Albrecht, Olaf Kniemeyer, Axel A. Brakhage, Matthias Berth, Reinhard Guthke

J. Integr. Bioinform., 2007

2006

Convergence of the proteomic pattern in cancer.

Ute Müller, Günther Ernst, Christian Melle, Reinhard Guthke, Ferdinand von Eggeling

Bioinform., 2006

The Net <i>Gene</i> rator Algorithm: Reconstruction of Gene Regulatory Networks.

Susanne Töpfer, Reinhard Guthke, Dominik Driesch, Dirk Woetzel, Michael Pfaff

Proceedings of the Knowledge Discovery and Emergent Complexity in Bioinformatics, 2006

Discovery of Gene Regulatory Networks in <i>Aspergillus fumigatus </i>.

Reinhard Guthke, Olaf Kniemeyer, Daniela Albrecht, Axel A. Brakhage, Ulrich Möller

Proceedings of the Knowledge Discovery and Emergent Complexity in Bioinformatics, 2006

Dynamic Model of Amino Acid and Carbohydrate Metabolism in Primary Human Liver Cells.

Reinhard Guthke, Wolfgang Schmidt-Heck, Gesine Pless, Rolf Gebhardt, Michael Pfaff, Joerg C. Gerlach, Katrin Zeilinger

Proceedings of the Biological and Medical Data Analysis, 7th International Symposium, 2006

2005

Dynamic Network Reconstruction from Gene Expression Data Describing the Effect of LiCl Stimulation on Hepatocytes.

Sebastian Zellmer, Wolfgang Schmidt-Heck, F. Gaunitz, A. Baldysiak-Figiel, Reinhard Guthke, Rolf Gebhardt

J. Integr. Bioinform., 2005

Dynamic network reconstruction from gene expression data applied to immune response during bacterial infection.

Reinhard Guthke, Ulrich Möller, Martin Hoffmann, Frank Thies, Susanne Töpfer

Bioinform., 2005

Prediction of the Performance of Human Liver Cell Bioreactors by Donor Organ Data.

Wolfgang Schmidt-Heck, Katrin Zeilinger, Gesine Pless, Joerg C. Gerlach, Michael Pfaff, Reinhard Guthke

Proceedings of the Biological and Medical Data Analysis, 6th International Symposium, 2005

2004

Network Analysis of the Kinetics of Amino Acid Metabolism in a Liver Cell Bioreactor.

Wolfgang Schmidt-Heck, Katrin Zeilinger, Michael Pfaff, Susanne Töpfer, Dominik Driesch, Gesine Pless, Peter Neuhaus, Joerg C. Gerlach, Reinhard Guthke

Proceedings of the Biological and Medical Data Analysis, 5th International Symposium, 2004

2002

Gene Expression Data Mining for Functional Genomics using Fuzzy Technology.

Reinhard Guthke, Wolfgang Schmidt-Heck, Daniel Hahn, Michael Pfaff

Proceedings of the Advances in Computational Intelligence and Learning: Methods and Applications, 2002

2001

Data mining based hybrid modelling and experimental design for bioprocess optimisation.

Reinhard Guthke, Wolfgang Schmidt-Heck, Ralph Berkholz

Proceedings of the 2nd International Conference in Fuzzy Logic and Technology, 2001

1999

Data and knowlage based experimental design for bioprocess optimization.

Reinhard Guthke, Wolfgang Schmidt-Heck, Peter Müller, Heike Rodig, Ralph Berkholz

Proceedings of the German Conference on Bioinformatics, 1999