Richa Agarwala

According to our database1, Richa Agarwala authored at least 23 papers between 1992 and 2010.

Collaborative distances:

Timeline

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Bibliography

2010
High-throughput sequencing of the DBA/2J mouse genome.
BMC Bioinformatics, 2010

2009
The National Center for Biotechnology Information's Protein Clusters Database.
Nucleic Acids Research, 2009

2008
Database indexing for production MegaBLAST searches.
Bioinformatics, 2008

Database indexing for production MegaBLAST searches.
Bioinformatics, 2008

2007
Improved BLAST searches using longer words for protein seeding.
Bioinformatics, 2007

rh_tsp_map 3.0: end-to-end radiation hybrid mapping with improved speed and quality control.
Bioinformatics, 2007

COBALT: constraint-based alignment tool for multiple protein sequences.
Bioinformatics, 2007

2006
A Fast and Symmetric DUST Implementation to Mask Low-Complexity DNA Sequences.
Journal of Computational Biology, 2006

WindowMasker: window-based masker for sequenced genomes.
Bioinformatics, 2006

2000
Inverse inbreeding coefficient problems with an application to linkage analysis of recessive diseases in inbred populations.
Discrete Applied Mathematics, 2000

1999
On the Approximability of Numerical Taxonomy (Fitting Distances by Tree Metrics).
SIAM J. Comput., 1999

Inverse Inbreeding Coefficient Problems with an Application to Linkage Analysis of Recessive Diseases in Inbred Populations.
Proceedings of the Tenth Annual ACM-SIAM Symposium on Discrete Algorithms, 1999

1997
Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model.
Journal of Computational Biology, 1997

Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model.
Proceedings of the Eighth Annual ACM-SIAM Symposium on Discrete Algorithms, 1997

Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model.
Proceedings of the First Annual International Conference on Research in Computational Molecular Biology, 1997

1996
Weighted Multidimensional Search and Its Application to Convex Optimization.
SIAM J. Comput., 1996

Simple Algorithms for Perfect Phylogeny and Triangulating Colored Graphs.
Int. J. Found. Comput. Sci., 1996

On the Approximability of Numerical Taxonomy (Fitting Distances by Tree Metrics).
Proceedings of the Seventh Annual ACM-SIAM Symposium on Discrete Algorithms, 1996

1995
Fast Algorithms for Inferring Evolutionary Trees.
Journal of Computational Biology, 1995

Weighted Search in the Plane.
Inf. Process. Lett., 1995

1994
A Polynomial-Time Algorithm for the Perfect Phylogeny Problem when the Number of Character States is Fixed.
SIAM J. Comput., 1994

1993
A Polynomial-Time Algorithm for the Perfect Phylogeny Problem when the Number of Character States is Fixed
Proceedings of the 34th Annual Symposium on Foundations of Computer Science, 1993

1992
Solving the Lagrangian Dual when the Number of Constraints is Fixed.
Proceedings of the Foundations of Software Technology and Theoretical Computer Science, 1992


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